Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 ABBA01031663.1-201ENST00000635630 790 ntBASIC23.64■■□□□ 1.37
VPS8Q8N3P4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 AC018735.1-201ENST00000437208 1502 ntBASIC23.64■■□□□ 1.37
VPS8Q8N3P4 AC015818.8-201ENST00000587907 1519 ntBASIC23.64■■□□□ 1.37
VPS8Q8N3P4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
VPS8Q8N3P4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 AL591846.1-201ENST00000451736 433 ntBASIC23.63■■□□□ 1.37
VPS8Q8N3P4 ZNF767P-206ENST00000513792 565 ntBASIC23.63■■□□□ 1.37
VPS8Q8N3P4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 AC002472.3-201ENST00000640124 621 ntBASIC23.63■■□□□ 1.37
VPS8Q8N3P4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS8Q8N3P4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 AL354877.1-201ENST00000424412 413 ntBASIC23.62■■□□□ 1.37
VPS8Q8N3P4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VPS8Q8N3P4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 AJ011931.1-201ENST00000618749 2492 ntBASIC23.61■■□□□ 1.37
VPS8Q8N3P4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 CD74-212ENST00000524315 584 ntTSL 5 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VPS8Q8N3P4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms