Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 GAPDHP40-201ENST00000505218 1006 ntBASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 AC104596.2-201ENST00000512793 793 ntBASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 SPDYE22P-201ENST00000582158 798 ntBASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 MIR3197-201ENST00000582241 73 ntBASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 AC099568.2-201ENST00000609194 695 ntBASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 AC068418.2-201ENST00000577309 3703 ntBASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 REXO1L4P-201ENST00000605109 1937 ntBASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB11FIP4Q86YS3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 INTS4P2-202ENST00000614726 2019 ntBASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 RPL5P21-201ENST00000404620 815 ntBASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 AP005018.1-201ENST00000525475 301 ntBASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 TP53TG3HP-202ENST00000569755 579 ntBASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB11FIP4Q86YS3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 AC026410.3-201ENST00000514280 936 ntBASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.02■□□□□ 0.48
RAB11FIP4Q86YS3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms