Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZNF546Q86UE3 AL139385.1-201ENST00000611744 3272 ntBASIC12.86□□□□□ -0.35
ZNF546Q86UE3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 AP002469.2-201ENST00000531724 424 ntBASIC12.85□□□□□ -0.35
ZNF546Q86UE3 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.85□□□□□ -0.35
ZNF546Q86UE3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.85□□□□□ -0.35
ZNF546Q86UE3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 NUTM2HP-201ENST00000442076 2498 ntBASIC12.85□□□□□ -0.35
ZNF546Q86UE3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF546Q86UE3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.84□□□□□ -0.35
ZNF546Q86UE3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF546Q86UE3 AL049597.2-201ENST00000565575 961 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms