Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CASC4Q6P4E1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 ZBED1P1-201ENST00000502364 1930 ntBASIC15.76■□□□□ 0.11
CASC4Q6P4E1 AL009178.2-201ENST00000597278 2719 ntBASIC15.76■□□□□ 0.11
CASC4Q6P4E1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 AL080243.2-201ENST00000418783 582 ntBASIC15.76■□□□□ 0.11
CASC4Q6P4E1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 AL033527.5-202ENST00000641632 1098 ntBASIC15.76■□□□□ 0.11
CASC4Q6P4E1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CASC4Q6P4E1 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 INTS4P1-203ENST00000641008 3683 ntBASIC15.75■□□□□ 0.11
CASC4Q6P4E1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.75■□□□□ 0.11
CASC4Q6P4E1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 AC069262.1-201ENST00000539058 672 ntBASIC15.75■□□□□ 0.11
CASC4Q6P4E1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 FGD5P1-202ENST00000614866 2498 ntBASIC15.75■□□□□ 0.11
CASC4Q6P4E1 AJ011931.1-201ENST00000618749 2492 ntBASIC15.75■□□□□ 0.11
CASC4Q6P4E1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 MROH4P-201ENST00000431302 1578 ntBASIC15.75■□□□□ 0.11
CASC4Q6P4E1 WASH3P-207ENST00000560956 1394 ntBASIC15.75■□□□□ 0.11
CASC4Q6P4E1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CASC4Q6P4E1 FO538757.1-201ENST00000623083 1397 ntBASIC15.75■□□□□ 0.11
CASC4Q6P4E1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CASC4Q6P4E1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms