Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 AKAP8P1-201ENST00000434743 1349 ntBASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 KRT18P28-201ENST00000453838 1332 ntBASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP4R4Q6NUP7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PPP4R4Q6NUP7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 TSEN15P1-201ENST00000423257 515 ntBASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 FAM8A3P-201ENST00000427218 844 ntBASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 AC023141.5-201ENST00000458585 616 ntBASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 AL513210.1-201ENST00000629608 234 ntBASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 HSPA7-201ENST00000445535 1927 ntBASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 BX640514.1-201ENST00000583223 1918 ntBASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PPP4R4Q6NUP7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 AC005252.3-201ENST00000623855 2258 ntBASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 AC010327.5-201ENST00000586923 3061 ntBASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 ADH5P3-201ENST00000433842 1137 ntBASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 SPCS2P4-201ENST00000436160 681 ntBASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms