Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AL158211.3-201ENST00000607385 239 ntBASIC17.53■□□□□ 0.4
ATL3Q6DD88 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AL359258.3-201ENST00000622910 2331 ntBASIC17.53■□□□□ 0.4
ATL3Q6DD88 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 KRT18P13-201ENST00000400056 1290 ntBASIC17.52■□□□□ 0.4
ATL3Q6DD88 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 AL391069.4-201ENST00000609583 481 ntBASIC17.52■□□□□ 0.4
ATL3Q6DD88 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.52■□□□□ 0.4
ATL3Q6DD88 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATL3Q6DD88 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
ATL3Q6DD88 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATL3Q6DD88 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
ATL3Q6DD88 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATL3Q6DD88 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ATL3Q6DD88 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.52■□□□□ 0.39
ATL3Q6DD88 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATL3Q6DD88 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATL3Q6DD88 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ATL3Q6DD88 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 AC107890.1-201ENST00000422478 521 ntBASIC17.51■□□□□ 0.39
ATL3Q6DD88 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 AC067863.1-201ENST00000494933 530 ntBASIC17.51■□□□□ 0.39
ATL3Q6DD88 MEIS3P1-201ENST00000495167 958 ntBASIC17.51■□□□□ 0.39
ATL3Q6DD88 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 AC015802.1-201ENST00000588104 1449 ntBASIC17.51■□□□□ 0.39
ATL3Q6DD88 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATL3Q6DD88 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ATL3Q6DD88 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.5■□□□□ 0.39
ATL3Q6DD88 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms