Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PRICKLE4Q2TBC4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PRICKLE4Q2TBC4 AC103702.1-201ENST00000548801 2630 ntBASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 CLUHP6-201ENST00000580789 941 ntBASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 AC027307.3-201ENST00000594262 1100 ntBASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRICKLE4Q2TBC4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 AJ011931.1-201ENST00000618749 2492 ntBASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 LILRP1-201ENST00000444199 1370 ntBASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 AL139094.1-201ENST00000405549 1188 ntBASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 AC068587.6-202ENST00000641839 5619 ntBASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRICKLE4Q2TBC4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms