Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 AF186996.4-201ENST00000467186 377 ntBASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 RNPS1P1-201ENST00000507437 918 ntBASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 AC243562.2-201ENST00000561247 970 ntBASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 GGTLC5P-201ENST00000617623 998 ntBASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC173Q0VFZ6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 KRT18P67-201ENST00000432816 1264 ntBASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 AC106730.1-201ENST00000566722 1090 ntBASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 AL031055.1-201ENST00000606362 631 ntBASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 AL805961.1-202ENST00000641562 540 ntBASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 BNIP3P1-202ENST00000550043 1585 ntBASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 AC055811.4-201ENST00000624039 1754 ntBASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC173Q0VFZ6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 AP000845.1-201ENST00000581677 2131 ntBASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
CCDC173Q0VFZ6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms