Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AC243562.1-201ENST00000560672 389 ntBASIC14.36□□□□□ -0.11
CD47Q08722 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.36□□□□□ -0.11
CD47Q08722 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.36□□□□□ -0.11
CD47Q08722 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD47Q08722 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.36□□□□□ -0.11
CD47Q08722 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD47Q08722 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.35□□□□□ -0.11
CD47Q08722 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.35□□□□□ -0.11
CD47Q08722 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 AP001267.2-201ENST00000532619 2086 ntBASIC14.35□□□□□ -0.11
CD47Q08722 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 AC142381.1-201ENST00000426099 345 ntBASIC14.35□□□□□ -0.11
CD47Q08722 SPCS2P4-201ENST00000436160 681 ntBASIC14.35□□□□□ -0.11
CD47Q08722 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.35□□□□□ -0.11
CD47Q08722 CEND1P1-201ENST00000451006 455 ntBASIC14.35□□□□□ -0.11
CD47Q08722 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.35□□□□□ -0.11
CD47Q08722 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.35□□□□□ -0.11
CD47Q08722 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.35□□□□□ -0.11
CD47Q08722 AP000842.3-202ENST00000569238 1080 ntBASIC14.35□□□□□ -0.11
CD47Q08722 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.35□□□□□ -0.11
CD47Q08722 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.35□□□□□ -0.11
CD47Q08722 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.35□□□□□ -0.11
CD47Q08722 REXO1L2P-201ENST00000425429 2069 ntBASIC14.35□□□□□ -0.11
CD47Q08722 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 FOXO1B-201ENST00000504678 1527 ntBASIC14.35□□□□□ -0.11
CD47Q08722 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD47Q08722 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.35□□□□□ -0.11
CD47Q08722 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD47Q08722 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
CD47Q08722 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.34□□□□□ -0.11
CD47Q08722 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD47Q08722 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 AC092135.3-201ENST00000624151 1846 ntBASIC14.34□□□□□ -0.11
CD47Q08722 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CD47Q08722 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 HLA-H-201ENST00000383620 1096 ntBASIC14.34□□□□□ -0.11
CD47Q08722 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 AL592309.1-201ENST00000443127 649 ntBASIC14.34□□□□□ -0.11
CD47Q08722 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.34□□□□□ -0.11
CD47Q08722 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.34□□□□□ -0.11
CD47Q08722 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms