Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 AC005829.1-201ENST00000570002 483 ntBASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ELL2P1-201ENST00000413990 1906 ntBASIC11.87□□□□□ -0.51
HIST1H1AQ02539 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 LINC00552-201ENST00000625151 2579 ntBASIC11.87□□□□□ -0.51
HIST1H1AQ02539 AL390755.1-201ENST00000623716 2027 ntBASIC11.87□□□□□ -0.51
HIST1H1AQ02539 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 BEND3P1-201ENST00000421591 1944 ntBASIC11.86□□□□□ -0.51
HIST1H1AQ02539 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 PHKG1P2-201ENST00000457537 863 ntBASIC11.86□□□□□ -0.51
HIST1H1AQ02539 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 MIR4313-201ENST00000580760 101 ntBASIC11.86□□□□□ -0.51
HIST1H1AQ02539 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HIST1H1AQ02539 AC127383.1-201ENST00000444697 1800 ntBASIC11.86□□□□□ -0.51
HIST1H1AQ02539 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms