Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC139749.1-202ENST00000617529 3139 ntBASIC14.87□□□□□ -0.03
HMGCS1Q01581 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 MIR600HG-201ENST00000449175 5984 ntBASIC14.86□□□□□ -0.03
HMGCS1Q01581 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 TOMM22P5-201ENST00000416399 439 ntBASIC14.86□□□□□ -0.03
HMGCS1Q01581 AC092580.3-201ENST00000430932 139 ntBASIC14.86□□□□□ -0.03
HMGCS1Q01581 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 SDHAP3-202ENST00000515467 728 ntBASIC14.86□□□□□ -0.03
HMGCS1Q01581 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 AC140878.1-201ENST00000565277 250 ntBASIC14.86□□□□□ -0.03
HMGCS1Q01581 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.86□□□□□ -0.03
HMGCS1Q01581 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 REXO1L4P-201ENST00000605109 1937 ntBASIC14.86□□□□□ -0.03
HMGCS1Q01581 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
HMGCS1Q01581 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGCS1Q01581 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 TREML5P-201ENST00000421694 576 ntBASIC14.85□□□□□ -0.03
HMGCS1Q01581 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 AL844908.2-201ENST00000609461 460 ntBASIC14.85□□□□□ -0.03
HMGCS1Q01581 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 INTS4P1-203ENST00000641008 3683 ntBASIC14.85□□□□□ -0.03
HMGCS1Q01581 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGCS1Q01581 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HMGCS1Q01581 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms