Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.64■□□□□ 0.57
SCN7AQ01118 AC092171.5-201ENST00000608012 942 ntBASIC18.64■□□□□ 0.57
SCN7AQ01118 AL022334.2-201ENST00000610000 484 ntBASIC18.64■□□□□ 0.57
SCN7AQ01118 BX088702.1-201ENST00000610784 235 ntBASIC18.64■□□□□ 0.57
SCN7AQ01118 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.64■□□□□ 0.57
SCN7AQ01118 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 AC005618.3-201ENST00000624928 458 ntBASIC18.64■□□□□ 0.57
SCN7AQ01118 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN7AQ01118 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.64■□□□□ 0.57
SCN7AQ01118 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN7AQ01118 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SCN7AQ01118 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SCN7AQ01118 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 MIR557-201ENST00000385239 98 ntBASIC18.63■□□□□ 0.57
SCN7AQ01118 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SCN7AQ01118 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.63■□□□□ 0.57
SCN7AQ01118 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.63■□□□□ 0.57
SCN7AQ01118 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.63■□□□□ 0.57
SCN7AQ01118 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCN7AQ01118 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
SCN7AQ01118 FAM90A2P-201ENST00000511144 1395 ntBASIC18.63■□□□□ 0.57
SCN7AQ01118 FAM90A25P-201ENST00000528404 1395 ntBASIC18.63■□□□□ 0.57
SCN7AQ01118 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCN7AQ01118 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 MIR3188-201ENST00000583494 85 ntBASIC18.63■□□□□ 0.57
SCN7AQ01118 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN7AQ01118 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SCN7AQ01118 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN7AQ01118 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN7AQ01118 DOC2GP-204ENST00000639052 2548 ntBASIC18.63■□□□□ 0.57
SCN7AQ01118 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 AC015909.3-201ENST00000572855 1794 ntBASIC18.63■□□□□ 0.57
SCN7AQ01118 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 MROH4P-201ENST00000431302 1578 ntBASIC18.63■□□□□ 0.57
SCN7AQ01118 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCN7AQ01118 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN7AQ01118 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN7AQ01118 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN7AQ01118 RPL8P2-201ENST00000430538 502 ntBASIC18.63■□□□□ 0.57
SCN7AQ01118 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN7AQ01118 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN7AQ01118 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN7AQ01118 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN7AQ01118 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.62■□□□□ 0.57
SCN7AQ01118 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.62■□□□□ 0.57
SCN7AQ01118 SALL4P5-201ENST00000419001 1760 ntBASIC18.62■□□□□ 0.57
SCN7AQ01118 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.62■□□□□ 0.57
SCN7AQ01118 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
SCN7AQ01118 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.62■□□□□ 0.57
SCN7AQ01118 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.62■□□□□ 0.57
SCN7AQ01118 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN7AQ01118 AC023024.2-201ENST00000623561 1993 ntBASIC18.62■□□□□ 0.57
SCN7AQ01118 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN7AQ01118 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SCN7AQ01118 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.62■□□□□ 0.57
SCN7AQ01118 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SCN7AQ01118 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SCN7AQ01118 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.62■□□□□ 0.57
SCN7AQ01118 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.62■□□□□ 0.57
SCN7AQ01118 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.62■□□□□ 0.57
SCN7AQ01118 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.62■□□□□ 0.57
SCN7AQ01118 AC087045.2-201ENST00000606279 1003 ntBASIC18.62■□□□□ 0.57
SCN7AQ01118 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SCN7AQ01118 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SCN7AQ01118 LINC02199-201ENST00000506655 2702 ntBASIC18.62■□□□□ 0.57
SCN7AQ01118 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN7AQ01118 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN7AQ01118 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN7AQ01118 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SCN7AQ01118 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SCN7AQ01118 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SCN7AQ01118 AC007292.2-201ENST00000593524 1812 ntBASIC18.61■□□□□ 0.57
SCN7AQ01118 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN7AQ01118 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms