Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
EFNB1P98172 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 AC004461.1-201ENST00000412461 403 ntBASIC13.72□□□□□ -0.21
EFNB1P98172 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
EFNB1P98172 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
EFNB1P98172 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNB1P98172 RBPMS2P1-201ENST00000437762 623 ntBASIC13.72□□□□□ -0.21
EFNB1P98172 MTND6P24-201ENST00000440466 518 ntBASIC13.72□□□□□ -0.21
EFNB1P98172 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB1P98172 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB1P98172 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB1P98172 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB1P98172 ALG1L5P-201ENST00000482043 771 ntBASIC13.72□□□□□ -0.21
EFNB1P98172 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNB1P98172 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.72□□□□□ -0.21
EFNB1P98172 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNB1P98172 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
EFNB1P98172 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.72□□□□□ -0.21
EFNB1P98172 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNB1P98172 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB1P98172 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB1P98172 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 AC018665.1-201ENST00000622927 1362 ntBASIC13.71□□□□□ -0.21
EFNB1P98172 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 MST1P2-201ENST00000457982 2291 ntBASIC13.71□□□□□ -0.21
EFNB1P98172 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNB1P98172 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNB1P98172 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
EFNB1P98172 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNB1P98172 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNB1P98172 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.71□□□□□ -0.21
EFNB1P98172 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.71□□□□□ -0.21
EFNB1P98172 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNB1P98172 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.71□□□□□ -0.21
EFNB1P98172 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 MIR4453-201ENST00000584019 89 ntBASIC13.71□□□□□ -0.21
EFNB1P98172 AC120114.3-201ENST00000611923 658 ntBASIC13.71□□□□□ -0.21
EFNB1P98172 AC023090.2-201ENST00000625182 2110 ntBASIC13.71□□□□□ -0.21
EFNB1P98172 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
EFNB1P98172 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB1P98172 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
EFNB1P98172 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
EFNB1P98172 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
EFNB1P98172 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
EFNB1P98172 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.71□□□□□ -0.22
EFNB1P98172 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNB1P98172 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNB1P98172 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNB1P98172 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
EFNB1P98172 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNB1P98172 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNB1P98172 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.71□□□□□ -0.22
EFNB1P98172 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
EFNB1P98172 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
EFNB1P98172 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 AGGF1P1-201ENST00000509500 2073 ntBASIC13.7□□□□□ -0.22
EFNB1P98172 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms