Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.59■□□□□ 0.09
PRAMEP78395 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.59■□□□□ 0.09
PRAMEP78395 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEP78395 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEP78395 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.59■□□□□ 0.09
PRAMEP78395 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.59■□□□□ 0.09
PRAMEP78395 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PRAMEP78395 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEP78395 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.59■□□□□ 0.09
PRAMEP78395 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEP78395 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEP78395 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEP78395 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEP78395 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
PRAMEP78395 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEP78395 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.59■□□□□ 0.09
PRAMEP78395 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PRAMEP78395 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PRAMEP78395 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PRAMEP78395 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PRAMEP78395 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PRAMEP78395 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PRAMEP78395 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PRAMEP78395 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PRAMEP78395 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PRAMEP78395 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PRAMEP78395 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.09
PRAMEP78395 FAM45BP-202ENST00000592932 1624 ntBASIC15.58■□□□□ 0.09
PRAMEP78395 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PRAMEP78395 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
PRAMEP78395 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.58■□□□□ 0.08
PRAMEP78395 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PRAMEP78395 AC055876.3-201ENST00000431496 288 ntBASIC15.58■□□□□ 0.08
PRAMEP78395 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.58■□□□□ 0.08
PRAMEP78395 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.58■□□□□ 0.08
PRAMEP78395 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.58■□□□□ 0.08
PRAMEP78395 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.58■□□□□ 0.08
PRAMEP78395 AC138649.4-201ENST00000612222 287 ntBASIC15.58■□□□□ 0.08
PRAMEP78395 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.58■□□□□ 0.08
PRAMEP78395 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PRAMEP78395 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 AC138969.3-201ENST00000546612 1459 ntBASIC15.58■□□□□ 0.08
PRAMEP78395 AC138932.2-201ENST00000548268 1459 ntBASIC15.58■□□□□ 0.08
PRAMEP78395 AC126755.4-201ENST00000549796 1459 ntBASIC15.58■□□□□ 0.08
PRAMEP78395 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRAMEP78395 AL121723.1-201ENST00000445194 1519 ntBASIC15.58■□□□□ 0.08
PRAMEP78395 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PRAMEP78395 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.57■□□□□ 0.08
PRAMEP78395 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
PRAMEP78395 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PRAMEP78395 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.57■□□□□ 0.08
PRAMEP78395 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.57■□□□□ 0.08
PRAMEP78395 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
PRAMEP78395 TSSK5P-201ENST00000423978 907 ntBASIC15.57■□□□□ 0.08
PRAMEP78395 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.57■□□□□ 0.08
PRAMEP78395 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.57■□□□□ 0.08
PRAMEP78395 AL512638.1-201ENST00000457493 794 ntBASIC15.57■□□□□ 0.08
PRAMEP78395 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.57■□□□□ 0.08
PRAMEP78395 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.57■□□□□ 0.08
PRAMEP78395 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.57■□□□□ 0.08
PRAMEP78395 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.57■□□□□ 0.08
PRAMEP78395 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.57■□□□□ 0.08
PRAMEP78395 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.57■□□□□ 0.08
PRAMEP78395 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.57■□□□□ 0.08
PRAMEP78395 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PRAMEP78395 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.57■□□□□ 0.08
PRAMEP78395 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.57■□□□□ 0.08
PRAMEP78395 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 AC004461.2-201ENST00000629517 803 ntBASIC15.57■□□□□ 0.08
PRAMEP78395 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PRAMEP78395 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRAMEP78395 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.57■□□□□ 0.08
PRAMEP78395 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms