Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
CLDN12P56749 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLDN12P56749 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CLDN12P56749 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLDN12P56749 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLDN12P56749 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 FAM220BP-201ENST00000377689 816 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 MIR1224-201ENST00000408193 85 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 AC136604.1-201ENST00000418535 575 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 AC007967.2-201ENST00000432613 625 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN12P56749 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.44□□□□□ -0.26
CLDN12P56749 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.44□□□□□ -0.26
CLDN12P56749 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN12P56749 AC093909.1-201ENST00000504731 1122 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 AC112191.1-201ENST00000523689 701 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.44□□□□□ -0.26
CLDN12P56749 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.44□□□□□ -0.26
CLDN12P56749 AL135744.1-201ENST00000565098 629 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.44□□□□□ -0.26
CLDN12P56749 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN12P56749 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 AL513190.1-201ENST00000621254 727 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 AC008267.7-201ENST00000624570 1194 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 AC107918.4-201ENST00000641966 3141 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.44□□□□□ -0.26
CLDN12P56749 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.44□□□□□ -0.26
CLDN12P56749 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN12P56749 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CLDN12P56749 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.44□□□□□ -0.26
CLDN12P56749 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
CLDN12P56749 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLDN12P56749 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN12P56749 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN12P56749 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.43□□□□□ -0.26
CLDN12P56749 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CLDN12P56749 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 KRT18P56-201ENST00000507275 550 ntBASIC13.43□□□□□ -0.26
CLDN12P56749 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN12P56749 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.43□□□□□ -0.26
CLDN12P56749 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 PDPK2P-202ENST00000562415 1191 ntBASIC13.43□□□□□ -0.26
CLDN12P56749 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CLDN12P56749 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN12P56749 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN12P56749 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN12P56749 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN12P56749 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms