Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.89□□□□□ -0.19
SUMO3P55854 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.89□□□□□ -0.19
SUMO3P55854 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SUMO3P55854 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.89□□□□□ -0.19
SUMO3P55854 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SUMO3P55854 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.89□□□□□ -0.19
SUMO3P55854 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SUMO3P55854 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.89□□□□□ -0.19
SUMO3P55854 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SUMO3P55854 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SUMO3P55854 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.88□□□□□ -0.19
SUMO3P55854 ACTBP8-201ENST00000403258 1108 ntBASIC13.88□□□□□ -0.19
SUMO3P55854 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.88□□□□□ -0.19
SUMO3P55854 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.88□□□□□ -0.19
SUMO3P55854 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.88□□□□□ -0.19
SUMO3P55854 CLUHP6-201ENST00000580789 941 ntBASIC13.88□□□□□ -0.19
SUMO3P55854 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.88□□□□□ -0.19
SUMO3P55854 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.88□□□□□ -0.19
SUMO3P55854 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
SUMO3P55854 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SUMO3P55854 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SUMO3P55854 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SUMO3P55854 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.88□□□□□ -0.19
SUMO3P55854 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.88□□□□□ -0.19
SUMO3P55854 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SUMO3P55854 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SUMO3P55854 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SUMO3P55854 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SUMO3P55854 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.87□□□□□ -0.19
SUMO3P55854 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.87□□□□□ -0.19
SUMO3P55854 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SUMO3P55854 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 RNU1-114P-201ENST00000365297 166 ntBASIC13.87□□□□□ -0.19
SUMO3P55854 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.87□□□□□ -0.19
SUMO3P55854 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SUMO3P55854 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.87□□□□□ -0.19
SUMO3P55854 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.87□□□□□ -0.19
SUMO3P55854 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SUMO3P55854 KLF2P2-201ENST00000416807 1039 ntBASIC13.87□□□□□ -0.19
SUMO3P55854 ACTG1P3-201ENST00000431775 1114 ntBASIC13.87□□□□□ -0.19
SUMO3P55854 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms