Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.69■□□□□ 0.58
NUP98P52948 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.69■□□□□ 0.58
NUP98P52948 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.69■□□□□ 0.58
NUP98P52948 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.69■□□□□ 0.58
NUP98P52948 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.69■□□□□ 0.58
NUP98P52948 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.69■□□□□ 0.58
NUP98P52948 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.69■□□□□ 0.58
NUP98P52948 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP98P52948 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NUP98P52948 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NUP98P52948 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 AC136759.1-202ENST00000530858 2194 ntBASIC18.68■□□□□ 0.58
NUP98P52948 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NUP98P52948 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
NUP98P52948 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 PUDPP3-201ENST00000445368 636 ntBASIC18.68■□□□□ 0.58
NUP98P52948 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.68■□□□□ 0.58
NUP98P52948 RN7SL67P-201ENST00000492147 296 ntBASIC18.68■□□□□ 0.58
NUP98P52948 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.68■□□□□ 0.58
NUP98P52948 RBM8B-201ENST00000555532 525 ntBASIC18.68■□□□□ 0.58
NUP98P52948 RN7SL163P-201ENST00000583100 276 ntBASIC18.68■□□□□ 0.58
NUP98P52948 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
NUP98P52948 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.68■□□□□ 0.58
NUP98P52948 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 SSR4P1-203ENST00000599569 2260 ntBASIC18.68■□□□□ 0.58
NUP98P52948 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NUP98P52948 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP98P52948 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.68■□□□□ 0.58
NUP98P52948 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.67■□□□□ 0.58
NUP98P52948 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 CICP12-201ENST00000455801 843 ntBASIC18.67■□□□□ 0.58
NUP98P52948 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.67■□□□□ 0.58
NUP98P52948 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.67■□□□□ 0.58
NUP98P52948 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.67■□□□□ 0.58
NUP98P52948 AC008825.2-201ENST00000603374 718 ntBASIC18.67■□□□□ 0.58
NUP98P52948 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.67■□□□□ 0.58
NUP98P52948 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.67■□□□□ 0.58
NUP98P52948 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.67■□□□□ 0.58
NUP98P52948 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NUP98P52948 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.67■□□□□ 0.58
NUP98P52948 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.67■□□□□ 0.58
NUP98P52948 AC006122.1-201ENST00000493323 440 ntBASIC18.67■□□□□ 0.58
NUP98P52948 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUP98P52948 PRKXP1-201ENST00000561423 1122 ntBASIC18.67■□□□□ 0.58
NUP98P52948 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUP98P52948 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NUP98P52948 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUP98P52948 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.67■□□□□ 0.58
NUP98P52948 PPT1-215ENST00000641471 2368 ntBASIC18.67■□□□□ 0.58
NUP98P52948 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP98P52948 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NUP98P52948 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.66■□□□□ 0.58
NUP98P52948 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.66■□□□□ 0.58
NUP98P52948 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 AC069218.1-201ENST00000435269 762 ntBASIC18.66■□□□□ 0.58
NUP98P52948 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.66■□□□□ 0.58
NUP98P52948 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.66■□□□□ 0.58
NUP98P52948 RTN3P1-201ENST00000536295 711 ntBASIC18.66■□□□□ 0.58
NUP98P52948 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.66■□□□□ 0.58
NUP98P52948 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.66■□□□□ 0.58
NUP98P52948 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms