Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.36□□□□□ -0.11
EFNA3P52797 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 HLA-K-203ENST00000430151 1046 ntBASIC14.36□□□□□ -0.11
EFNA3P52797 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.36□□□□□ -0.11
EFNA3P52797 AC104989.1-201ENST00000519711 778 ntBASIC14.36□□□□□ -0.11
EFNA3P52797 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 AC025279.2-201ENST00000569730 653 ntBASIC14.36□□□□□ -0.11
EFNA3P52797 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.36□□□□□ -0.11
EFNA3P52797 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.36□□□□□ -0.11
EFNA3P52797 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.36□□□□□ -0.11
EFNA3P52797 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
EFNA3P52797 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 KRT8P35-201ENST00000483942 1338 ntBASIC14.36□□□□□ -0.11
EFNA3P52797 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EFNA3P52797 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 AC087481.3-201ENST00000602886 1894 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNA3P52797 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
EFNA3P52797 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EFNA3P52797 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EFNA3P52797 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
EFNA3P52797 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
EFNA3P52797 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNA3P52797 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
EFNA3P52797 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNA3P52797 ACTBP8-201ENST00000403258 1108 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 RPL5P21-201ENST00000404620 815 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 KRT43P-201ENST00000434019 910 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 EIF3FP3-201ENST00000434851 1086 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 RPL7P3-201ENST00000441388 714 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.35□□□□□ -0.11
EFNA3P52797 KRT223P-202ENST00000449164 1292 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.35□□□□□ -0.11
EFNA3P52797 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNA3P52797 AP000812.2-201ENST00000538934 718 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.35□□□□□ -0.11
EFNA3P52797 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
EFNA3P52797 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EFNA3P52797 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.35□□□□□ -0.11
EFNA3P52797 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNA3P52797 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
EFNA3P52797 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EFNA3P52797 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.35□□□□□ -0.11
EFNA3P52797 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EFNA3P52797 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 REXO1L5P-201ENST00000622260 2098 ntBASIC14.34□□□□□ -0.11
EFNA3P52797 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms