Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.57□□□□□ -0.08
CLK1P49759 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.57□□□□□ -0.08
CLK1P49759 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 AGAP7P-201ENST00000582299 2062 ntBASIC14.56□□□□□ -0.08
CLK1P49759 AGAP14-201ENST00000624701 2060 ntBASIC14.56□□□□□ -0.08
CLK1P49759 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 AC015656.1-201ENST00000624209 3578 ntBASIC14.56□□□□□ -0.08
CLK1P49759 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.56□□□□□ -0.08
CLK1P49759 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 GPS2P2-201ENST00000430745 888 ntBASIC14.56□□□□□ -0.08
CLK1P49759 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 HLA-J-203ENST00000494367 1087 ntBASIC14.56□□□□□ -0.08
CLK1P49759 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.56□□□□□ -0.08
CLK1P49759 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.56□□□□□ -0.08
CLK1P49759 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 AL035456.1-201ENST00000456064 1369 ntBASIC14.56□□□□□ -0.08
CLK1P49759 AC090616.6-203ENST00000579186 1945 ntBASIC14.56□□□□□ -0.08
CLK1P49759 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.56□□□□□ -0.08
CLK1P49759 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLK1P49759 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.56□□□□□ -0.08
CLK1P49759 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.56□□□□□ -0.08
CLK1P49759 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLK1P49759 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLK1P49759 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CLK1P49759 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.55□□□□□ -0.08
CLK1P49759 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CLK1P49759 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 AC004987.2-201ENST00000395959 1148 ntBASIC14.55□□□□□ -0.08
CLK1P49759 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.55□□□□□ -0.08
CLK1P49759 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 AC026150.2-201ENST00000564693 1156 ntBASIC14.55□□□□□ -0.08
CLK1P49759 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
CLK1P49759 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.55□□□□□ -0.08
CLK1P49759 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CLK1P49759 AP001160.2-201ENST00000596071 487 ntBASIC14.55□□□□□ -0.08
CLK1P49759 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.55□□□□□ -0.08
CLK1P49759 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 AL596442.2-201ENST00000610240 980 ntBASIC14.55□□□□□ -0.08
CLK1P49759 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.55□□□□□ -0.08
CLK1P49759 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.55□□□□□ -0.08
CLK1P49759 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 AL691432.1-201ENST00000596308 1422 ntBASIC14.55□□□□□ -0.08
CLK1P49759 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 MROH4P-201ENST00000431302 1578 ntBASIC14.55□□□□□ -0.08
CLK1P49759 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.55□□□□□ -0.08
CLK1P49759 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms