Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 KRT17P4-201ENST00000429445 819 ntBASIC16.91■□□□□ 0.3
CENPFP49454 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.91■□□□□ 0.3
CENPFP49454 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.91■□□□□ 0.3
CENPFP49454 NUDT4P2-201ENST00000578341 546 ntBASIC16.91■□□□□ 0.3
CENPFP49454 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.91■□□□□ 0.3
CENPFP49454 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CENPFP49454 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.91■□□□□ 0.3
CENPFP49454 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.91■□□□□ 0.3
CENPFP49454 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CENPFP49454 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CENPFP49454 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.91■□□□□ 0.3
CENPFP49454 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 COX20P1-201ENST00000366529 357 ntBASIC16.91■□□□□ 0.3
CENPFP49454 RPL8P2-201ENST00000430538 502 ntBASIC16.91■□□□□ 0.3
CENPFP49454 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.91■□□□□ 0.3
CENPFP49454 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CENPFP49454 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.91■□□□□ 0.3
CENPFP49454 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.91■□□□□ 0.3
CENPFP49454 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.91■□□□□ 0.3
CENPFP49454 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CENPFP49454 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.9■□□□□ 0.3
CENPFP49454 PSMD4P1-201ENST00000433951 1109 ntBASIC16.9■□□□□ 0.3
CENPFP49454 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CENPFP49454 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.9■□□□□ 0.3
CENPFP49454 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CENPFP49454 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.9■□□□□ 0.3
CENPFP49454 AC084364.1-201ENST00000551967 1556 ntBASIC16.9■□□□□ 0.3
CENPFP49454 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CENPFP49454 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.9■□□□□ 0.3
CENPFP49454 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.9■□□□□ 0.3
CENPFP49454 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.9■□□□□ 0.3
CENPFP49454 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.9■□□□□ 0.3
CENPFP49454 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.9■□□□□ 0.3
CENPFP49454 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CENPFP49454 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CENPFP49454 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.89■□□□□ 0.3
CENPFP49454 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 AL357373.1-201ENST00000394974 322 ntBASIC16.89■□□□□ 0.29
CENPFP49454 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.89■□□□□ 0.29
CENPFP49454 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.89■□□□□ 0.29
CENPFP49454 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CENPFP49454 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.89■□□□□ 0.29
CENPFP49454 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.89■□□□□ 0.29
CENPFP49454 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CENPFP49454 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.89■□□□□ 0.29
CENPFP49454 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 AC005962.1-201ENST00000584100 773 ntBASIC16.89■□□□□ 0.29
CENPFP49454 AL627230.2-201ENST00000613254 655 ntBASIC16.89■□□□□ 0.29
CENPFP49454 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.89■□□□□ 0.29
CENPFP49454 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.89■□□□□ 0.29
CENPFP49454 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CENPFP49454 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.89■□□□□ 0.29
CENPFP49454 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.89■□□□□ 0.29
CENPFP49454 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.89■□□□□ 0.29
CENPFP49454 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.88■□□□□ 0.29
CENPFP49454 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CENPFP49454 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.88■□□□□ 0.29
CENPFP49454 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPFP49454 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPFP49454 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CENPFP49454 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CENPFP49454 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CENPFP49454 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms