Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1DP48730 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.34■□□□□ 0.05
CSNK1DP48730 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1DP48730 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CSNK1DP48730 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1DP48730 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1DP48730 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.34■□□□□ 0.05
CSNK1DP48730 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1DP48730 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.34■□□□□ 0.05
CSNK1DP48730 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1DP48730 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1DP48730 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1DP48730 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1DP48730 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1DP48730 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSNK1DP48730 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSNK1DP48730 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CSNK1DP48730 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSNK1DP48730 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CSNK1DP48730 AL137783.1-201ENST00000623494 1896 ntBASIC15.33■□□□□ 0.05
CSNK1DP48730 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.33■□□□□ 0.05
CSNK1DP48730 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSNK1DP48730 PDIA3P1-201ENST00000471856 1510 ntBASIC15.33■□□□□ 0.05
CSNK1DP48730 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.33■□□□□ 0.05
CSNK1DP48730 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.33■□□□□ 0.05
CSNK1DP48730 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1DP48730 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1DP48730 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1DP48730 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1DP48730 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CSNK1DP48730 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1DP48730 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 GK-202ENST00000378941 458 ntTSL 3 BASIC15.33■□□□□ 0.04
CSNK1DP48730 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 AC245100.3-201ENST00000441281 285 ntBASIC15.33■□□□□ 0.04
CSNK1DP48730 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.33■□□□□ 0.04
CSNK1DP48730 RNA5SP486-201ENST00000515961 83 ntBASIC15.33■□□□□ 0.04
CSNK1DP48730 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CSNK1DP48730 KRT90P-201ENST00000549264 1064 ntBASIC15.33■□□□□ 0.04
CSNK1DP48730 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.33■□□□□ 0.04
CSNK1DP48730 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.33■□□□□ 0.04
CSNK1DP48730 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CSNK1DP48730 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1DP48730 ENPP7P14-201ENST00000621765 1040 ntBASIC15.33■□□□□ 0.04
CSNK1DP48730 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1DP48730 AC055811.4-201ENST00000624039 1754 ntBASIC15.33■□□□□ 0.04
CSNK1DP48730 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CSNK1DP48730 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1DP48730 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CSNK1DP48730 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1DP48730 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1DP48730 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1DP48730 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CSNK1DP48730 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1DP48730 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.32■□□□□ 0.04
CSNK1DP48730 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CSNK1DP48730 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CSNK1DP48730 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 MIR1909-201ENST00000411312 80 ntBASIC15.32■□□□□ 0.04
CSNK1DP48730 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1DP48730 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.32■□□□□ 0.04
CSNK1DP48730 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.32■□□□□ 0.04
CSNK1DP48730 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.32■□□□□ 0.04
CSNK1DP48730 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.32■□□□□ 0.04
CSNK1DP48730 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1DP48730 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms