Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.91□□□□□ -0.18
APOBEC1P41238 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
APOBEC1P41238 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.91□□□□□ -0.18
APOBEC1P41238 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.91□□□□□ -0.18
APOBEC1P41238 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.91□□□□□ -0.18
APOBEC1P41238 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.91□□□□□ -0.18
APOBEC1P41238 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 REXO1L4P-201ENST00000605109 1937 ntBASIC13.91□□□□□ -0.18
APOBEC1P41238 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.91□□□□□ -0.18
APOBEC1P41238 TCAF2P1-201ENST00000291129 2421 ntBASIC13.91□□□□□ -0.18
APOBEC1P41238 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBEC1P41238 AGAP7P-201ENST00000582299 2062 ntBASIC13.91□□□□□ -0.18
APOBEC1P41238 AGAP14-201ENST00000624701 2060 ntBASIC13.91□□□□□ -0.18
APOBEC1P41238 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 AC093525.8-201ENST00000624099 1342 ntBASIC13.9□□□□□ -0.18
APOBEC1P41238 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.9□□□□□ -0.18
APOBEC1P41238 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
APOBEC1P41238 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.9□□□□□ -0.18
APOBEC1P41238 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.9□□□□□ -0.18
APOBEC1P41238 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.9□□□□□ -0.18
APOBEC1P41238 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.9□□□□□ -0.18
APOBEC1P41238 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.9□□□□□ -0.18
APOBEC1P41238 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.9□□□□□ -0.18
APOBEC1P41238 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.9□□□□□ -0.18
APOBEC1P41238 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.9□□□□□ -0.18
APOBEC1P41238 ENPP7P5-201ENST00000541031 1031 ntBASIC13.9□□□□□ -0.18
APOBEC1P41238 AC190387.1-201ENST00000551683 408 ntBASIC13.9□□□□□ -0.18
APOBEC1P41238 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 TP53TG3HP-202ENST00000569755 579 ntBASIC13.9□□□□□ -0.18
APOBEC1P41238 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.9□□□□□ -0.18
APOBEC1P41238 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.9□□□□□ -0.18
APOBEC1P41238 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.9□□□□□ -0.18
APOBEC1P41238 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.9□□□□□ -0.18
APOBEC1P41238 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
APOBEC1P41238 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
APOBEC1P41238 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.9□□□□□ -0.18
APOBEC1P41238 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
APOBEC1P41238 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOBEC1P41238 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.9□□□□□ -0.19
APOBEC1P41238 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
APOBEC1P41238 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
APOBEC1P41238 AC091951.1-201ENST00000512854 2465 ntBASIC13.89□□□□□ -0.19
APOBEC1P41238 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.89□□□□□ -0.19
APOBEC1P41238 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms