Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.62■□□□□ 0.09
HADHAP40939 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.61■□□□□ 0.09
HADHAP40939 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 OR2I1P-210ENST00000642037 4691 ntBASIC15.61■□□□□ 0.09
HADHAP40939 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.61■□□□□ 0.09
HADHAP40939 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
HADHAP40939 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.61■□□□□ 0.09
HADHAP40939 INGX-202ENST00000489074 768 ntBASIC15.61■□□□□ 0.09
HADHAP40939 MEIS3P1-201ENST00000495167 958 ntBASIC15.61■□□□□ 0.09
HADHAP40939 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.61■□□□□ 0.09
HADHAP40939 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HADHAP40939 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HADHAP40939 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
HADHAP40939 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HADHAP40939 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.61■□□□□ 0.09
HADHAP40939 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
HADHAP40939 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 LINC02228-204ENST00000642115 2962 ntBASIC15.6■□□□□ 0.09
HADHAP40939 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
HADHAP40939 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 AL121723.1-201ENST00000445194 1519 ntBASIC15.6■□□□□ 0.09
HADHAP40939 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
HADHAP40939 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HADHAP40939 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.6■□□□□ 0.09
HADHAP40939 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.6■□□□□ 0.09
HADHAP40939 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.6■□□□□ 0.09
HADHAP40939 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.6■□□□□ 0.09
HADHAP40939 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.6■□□□□ 0.09
HADHAP40939 SRD5A3P1-201ENST00000603021 949 ntBASIC15.6■□□□□ 0.09
HADHAP40939 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.6■□□□□ 0.09
HADHAP40939 AC004840.1-201ENST00000636359 365 ntBASIC15.6■□□□□ 0.09
HADHAP40939 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HADHAP40939 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HADHAP40939 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.59■□□□□ 0.09
HADHAP40939 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HADHAP40939 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HADHAP40939 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.59■□□□□ 0.09
HADHAP40939 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HADHAP40939 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
HADHAP40939 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HADHAP40939 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.59■□□□□ 0.09
HADHAP40939 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms