Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFC1P35251 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.24■□□□□ 0.19
RFC1P35251 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.24■□□□□ 0.19
RFC1P35251 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RFC1P35251 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RFC1P35251 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.24■□□□□ 0.19
RFC1P35251 SPDYE19P-201ENST00000338590 713 ntBASIC16.24■□□□□ 0.19
RFC1P35251 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.24■□□□□ 0.19
RFC1P35251 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RFC1P35251 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.24■□□□□ 0.19
RFC1P35251 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.24■□□□□ 0.19
RFC1P35251 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.24■□□□□ 0.19
RFC1P35251 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.24■□□□□ 0.19
RFC1P35251 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.24■□□□□ 0.19
RFC1P35251 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.24■□□□□ 0.19
RFC1P35251 RARRES2P5-201ENST00000564013 466 ntBASIC16.24■□□□□ 0.19
RFC1P35251 AL645728.2-202ENST00000641679 227 ntBASIC16.24■□□□□ 0.19
RFC1P35251 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.24■□□□□ 0.19
RFC1P35251 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.24■□□□□ 0.19
RFC1P35251 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFC1P35251 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RFC1P35251 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFC1P35251 AC097376.2-205ENST00000610159 5334 ntBASIC16.24■□□□□ 0.19
RFC1P35251 AP000845.1-201ENST00000581677 2131 ntBASIC16.24■□□□□ 0.19
RFC1P35251 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RFC1P35251 LINC02228-204ENST00000642115 2962 ntBASIC16.23■□□□□ 0.19
RFC1P35251 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.23■□□□□ 0.19
RFC1P35251 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RFC1P35251 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RFC1P35251 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.23■□□□□ 0.19
RFC1P35251 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.23■□□□□ 0.19
RFC1P35251 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.23■□□□□ 0.19
RFC1P35251 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.23■□□□□ 0.19
RFC1P35251 TPRX2P-201ENST00000535362 881 ntBASIC16.23■□□□□ 0.19
RFC1P35251 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
RFC1P35251 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.23■□□□□ 0.19
RFC1P35251 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.23■□□□□ 0.19
RFC1P35251 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RFC1P35251 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RFC1P35251 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.23■□□□□ 0.19
RFC1P35251 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 AL359258.3-201ENST00000622910 2331 ntBASIC16.23■□□□□ 0.19
RFC1P35251 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC1P35251 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.22■□□□□ 0.19
RFC1P35251 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RFC1P35251 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RFC1P35251 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.22■□□□□ 0.19
RFC1P35251 ZBED1P1-201ENST00000502364 1930 ntBASIC16.22■□□□□ 0.19
RFC1P35251 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms