Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.31■□□□□ 0.2
CTNNA1P35221 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.31■□□□□ 0.2
CTNNA1P35221 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.31■□□□□ 0.2
CTNNA1P35221 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.31■□□□□ 0.2
CTNNA1P35221 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.31■□□□□ 0.2
CTNNA1P35221 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CTNNA1P35221 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.31■□□□□ 0.2
CTNNA1P35221 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTNNA1P35221 AC015910.1-201ENST00000579400 975 ntBASIC16.31■□□□□ 0.2
CTNNA1P35221 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.31■□□□□ 0.2
CTNNA1P35221 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.31■□□□□ 0.2
CTNNA1P35221 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTNNA1P35221 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CTNNA1P35221 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTNNA1P35221 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CTNNA1P35221 Z97205.2-201ENST00000564697 1639 ntBASIC16.3■□□□□ 0.2
CTNNA1P35221 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.3■□□□□ 0.2
CTNNA1P35221 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CTNNA1P35221 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CTNNA1P35221 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.3■□□□□ 0.2
CTNNA1P35221 AL080243.2-201ENST00000418783 582 ntBASIC16.3■□□□□ 0.2
CTNNA1P35221 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CTNNA1P35221 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.3■□□□□ 0.2
CTNNA1P35221 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.3■□□□□ 0.2
CTNNA1P35221 AC023141.5-201ENST00000458585 616 ntBASIC16.3■□□□□ 0.2
CTNNA1P35221 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.3■□□□□ 0.2
CTNNA1P35221 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.3■□□□□ 0.2
CTNNA1P35221 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.3■□□□□ 0.2
CTNNA1P35221 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CTNNA1P35221 MIR4453-201ENST00000584019 89 ntBASIC16.3■□□□□ 0.2
CTNNA1P35221 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.3■□□□□ 0.2
CTNNA1P35221 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.3■□□□□ 0.2
CTNNA1P35221 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.3■□□□□ 0.2
CTNNA1P35221 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.3■□□□□ 0.2
CTNNA1P35221 REXO1L2P-201ENST00000425429 2069 ntBASIC16.3■□□□□ 0.2
CTNNA1P35221 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTNNA1P35221 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
CTNNA1P35221 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.29■□□□□ 0.2
CTNNA1P35221 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 AC140479.7-201ENST00000636301 2332 ntBASIC16.29■□□□□ 0.2
CTNNA1P35221 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CTNNA1P35221 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.29■□□□□ 0.2
CTNNA1P35221 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CTNNA1P35221 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CTNNA1P35221 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTNNA1P35221 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.29■□□□□ 0.2
CTNNA1P35221 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.29■□□□□ 0.2
CTNNA1P35221 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.29■□□□□ 0.2
CTNNA1P35221 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.29■□□□□ 0.2
CTNNA1P35221 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTNNA1P35221 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.29■□□□□ 0.2
CTNNA1P35221 AP000845.1-201ENST00000581677 2131 ntBASIC16.29■□□□□ 0.2
CTNNA1P35221 MIR6080-201ENST00000617359 66 ntBASIC16.29■□□□□ 0.2
CTNNA1P35221 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms