Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RAB3BP20337 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RAB3BP20337 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB3BP20337 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB3BP20337 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB3BP20337 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB3BP20337 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB3BP20337 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB3BP20337 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB3BP20337 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB3BP20337 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB3BP20337 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RAB3BP20337 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RAB3BP20337 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB3BP20337 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB3BP20337 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 AC152010.1-201ENST00000415779 2006 ntBASIC13.54□□□□□ -0.24
RAB3BP20337 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB3BP20337 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RAB3BP20337 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB3BP20337 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.54□□□□□ -0.24
RAB3BP20337 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.54□□□□□ -0.24
RAB3BP20337 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB3BP20337 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 AL031008.1-201ENST00000619963 541 ntBASIC13.54□□□□□ -0.24
RAB3BP20337 FAM215A-202ENST00000632077 792 ntBASIC13.54□□□□□ -0.24
RAB3BP20337 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 AC025580.3-201ENST00000617932 1424 ntBASIC13.54□□□□□ -0.24
RAB3BP20337 AC018442.1-201ENST00000421439 2061 ntBASIC13.54□□□□□ -0.24
RAB3BP20337 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB3BP20337 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB3BP20337 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB3BP20337 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RAB3BP20337 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.53□□□□□ -0.24
RAB3BP20337 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.53□□□□□ -0.24
RAB3BP20337 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB3BP20337 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB3BP20337 AC009947.1-201ENST00000444350 727 ntBASIC13.53□□□□□ -0.24
RAB3BP20337 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RAB3BP20337 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB3BP20337 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.53□□□□□ -0.24
RAB3BP20337 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB3BP20337 AC026979.3-201ENST00000607315 403 ntBASIC13.53□□□□□ -0.24
RAB3BP20337 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms