Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.06□□□□□ -0.16
CD53P19397 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 PCDHA3-202ENST00000532566 4594 ntBASIC14.06□□□□□ -0.16
CD53P19397 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.06□□□□□ -0.16
CD53P19397 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.06□□□□□ -0.16
CD53P19397 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CD53P19397 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.06□□□□□ -0.16
CD53P19397 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD53P19397 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.05□□□□□ -0.16
CD53P19397 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.05□□□□□ -0.16
CD53P19397 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.05□□□□□ -0.16
CD53P19397 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD53P19397 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.05□□□□□ -0.16
CD53P19397 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.05□□□□□ -0.16
CD53P19397 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD53P19397 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.05□□□□□ -0.16
CD53P19397 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.05□□□□□ -0.16
CD53P19397 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CD53P19397 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.05□□□□□ -0.16
CD53P19397 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.05□□□□□ -0.16
CD53P19397 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.05□□□□□ -0.16
CD53P19397 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.05□□□□□ -0.16
CD53P19397 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.05□□□□□ -0.16
CD53P19397 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.05□□□□□ -0.16
CD53P19397 AC010336.2-201ENST00000564226 506 ntBASIC14.05□□□□□ -0.16
CD53P19397 MIR4313-201ENST00000580760 101 ntBASIC14.05□□□□□ -0.16
CD53P19397 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.05□□□□□ -0.16
CD53P19397 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.05□□□□□ -0.16
CD53P19397 SPTSSB-204ENST00000617024 1292 ntBASIC14.05□□□□□ -0.16
CD53P19397 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD53P19397 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD53P19397 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD53P19397 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD53P19397 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.04□□□□□ -0.16
CD53P19397 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.04□□□□□ -0.16
CD53P19397 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CD53P19397 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 DGCR5-201ENST00000399539 862 ntBASIC14.04□□□□□ -0.16
CD53P19397 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.04□□□□□ -0.16
CD53P19397 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 INE1-201ENST00000456273 945 ntBASIC14.04□□□□□ -0.16
CD53P19397 AC022494.1-201ENST00000466044 728 ntBASIC14.04□□□□□ -0.16
CD53P19397 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.04□□□□□ -0.16
CD53P19397 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.04□□□□□ -0.16
CD53P19397 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.04□□□□□ -0.16
CD53P19397 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.04□□□□□ -0.16
CD53P19397 AC135586.1-201ENST00000539323 574 ntBASIC14.04□□□□□ -0.16
CD53P19397 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.04□□□□□ -0.16
CD53P19397 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD53P19397 IGHV3-72-202ENST00000621503 303 ntBASIC14.04□□□□□ -0.16
CD53P19397 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.04□□□□□ -0.16
CD53P19397 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms