Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.5■□□□□ 0.23
SYN1P17600 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 INE2-201ENST00000630399 1874 ntBASIC16.5■□□□□ 0.23
SYN1P17600 AC092171.3-201ENST00000610122 2651 ntBASIC16.5■□□□□ 0.23
SYN1P17600 FAM90A7P-201ENST00000382628 1395 ntBASIC16.5■□□□□ 0.23
SYN1P17600 FAM90A23P-201ENST00000400136 1395 ntBASIC16.5■□□□□ 0.23
SYN1P17600 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SYN1P17600 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SYN1P17600 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.49■□□□□ 0.23
SYN1P17600 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SYN1P17600 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SYN1P17600 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SYN1P17600 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SYN1P17600 AL008718.2-201ENST00000609206 1313 ntBASIC16.49■□□□□ 0.23
SYN1P17600 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.49■□□□□ 0.23
SYN1P17600 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SYN1P17600 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 AL583805.1-201ENST00000391389 531 ntBASIC16.49■□□□□ 0.23
SYN1P17600 RN7SKP175-201ENST00000408472 289 ntBASIC16.49■□□□□ 0.23
SYN1P17600 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.49■□□□□ 0.23
SYN1P17600 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.49■□□□□ 0.23
SYN1P17600 FAM86KP-201ENST00000509817 987 ntBASIC16.49■□□□□ 0.23
SYN1P17600 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.49■□□□□ 0.23
SYN1P17600 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.49■□□□□ 0.23
SYN1P17600 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SYN1P17600 AC105137.3-201ENST00000617588 984 ntBASIC16.49■□□□□ 0.23
SYN1P17600 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.49■□□□□ 0.23
SYN1P17600 AC092299.1-201ENST00000632679 757 ntBASIC16.49■□□□□ 0.23
SYN1P17600 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SYN1P17600 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
SYN1P17600 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SYN1P17600 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SYN1P17600 FLJ38576-201ENST00000623820 2459 ntBASIC16.48■□□□□ 0.23
SYN1P17600 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.48■□□□□ 0.23
SYN1P17600 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SYN1P17600 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
SYN1P17600 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.48■□□□□ 0.23
SYN1P17600 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SYN1P17600 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SYN1P17600 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 AL627422.1-201ENST00000434104 580 ntBASIC16.48■□□□□ 0.23
SYN1P17600 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SYN1P17600 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.48■□□□□ 0.23
SYN1P17600 AC005962.1-201ENST00000584100 773 ntBASIC16.48■□□□□ 0.23
SYN1P17600 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.48■□□□□ 0.23
SYN1P17600 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.48■□□□□ 0.23
SYN1P17600 AC087392.5-201ENST00000612517 489 ntBASIC16.48■□□□□ 0.23
SYN1P17600 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.48■□□□□ 0.23
SYN1P17600 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 AC244394.1-201ENST00000435000 1665 ntBASIC16.48■□□□□ 0.23
SYN1P17600 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SYN1P17600 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.48■□□□□ 0.23
SYN1P17600 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SYN1P17600 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SYN1P17600 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SYN1P17600 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 AC011477.6-201ENST00000604980 1927 ntBASIC16.47■□□□□ 0.23
SYN1P17600 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms