Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HOXC6P09630 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.18■□□□□ 0.34
HOXC6P09630 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.18■□□□□ 0.34
HOXC6P09630 AC104073.2-201ENST00000453737 312 ntBASIC17.18■□□□□ 0.34
HOXC6P09630 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.18■□□□□ 0.34
HOXC6P09630 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.18■□□□□ 0.34
HOXC6P09630 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.18■□□□□ 0.34
HOXC6P09630 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.18■□□□□ 0.34
HOXC6P09630 AC009955.4-201ENST00000597192 544 ntBASIC17.18■□□□□ 0.34
HOXC6P09630 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.18■□□□□ 0.34
HOXC6P09630 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.18■□□□□ 0.34
HOXC6P09630 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HOXC6P09630 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.18■□□□□ 0.34
HOXC6P09630 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
HOXC6P09630 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HOXC6P09630 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HOXC6P09630 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.17■□□□□ 0.34
HOXC6P09630 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HOXC6P09630 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HOXC6P09630 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HOXC6P09630 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.17■□□□□ 0.34
HOXC6P09630 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.17■□□□□ 0.34
HOXC6P09630 PUDPP3-201ENST00000445368 636 ntBASIC17.17■□□□□ 0.34
HOXC6P09630 EEF1DP6-201ENST00000449232 372 ntBASIC17.17■□□□□ 0.34
HOXC6P09630 LDHBP1-201ENST00000455730 1119 ntBASIC17.17■□□□□ 0.34
HOXC6P09630 AC012618.1-201ENST00000461223 412 ntBASIC17.17■□□□□ 0.34
HOXC6P09630 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.17■□□□□ 0.34
HOXC6P09630 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.17■□□□□ 0.34
HOXC6P09630 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.17■□□□□ 0.34
HOXC6P09630 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.17■□□□□ 0.34
HOXC6P09630 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 AL358472.3-201ENST00000608147 415 ntBASIC17.17■□□□□ 0.34
HOXC6P09630 AL353726.2-201ENST00000623259 884 ntBASIC17.17■□□□□ 0.34
HOXC6P09630 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HOXC6P09630 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HOXC6P09630 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HOXC6P09630 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXC6P09630 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.17■□□□□ 0.34
HOXC6P09630 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HOXC6P09630 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
HOXC6P09630 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HOXC6P09630 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.16■□□□□ 0.34
HOXC6P09630 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC6P09630 RN7SKP175-201ENST00000408472 289 ntBASIC17.16■□□□□ 0.34
HOXC6P09630 AC006335.1-201ENST00000445200 547 ntBASIC17.16■□□□□ 0.34
HOXC6P09630 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.16■□□□□ 0.34
HOXC6P09630 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.16■□□□□ 0.34
HOXC6P09630 AC026434.2-201ENST00000506094 1078 ntBASIC17.16■□□□□ 0.34
HOXC6P09630 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.16■□□□□ 0.34
HOXC6P09630 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC6P09630 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC6P09630 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
HOXC6P09630 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.16■□□□□ 0.34
HOXC6P09630 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.16■□□□□ 0.34
HOXC6P09630 MIR5572-201ENST00000583188 137 ntBASIC17.16■□□□□ 0.34
HOXC6P09630 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HOXC6P09630 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.16■□□□□ 0.34
HOXC6P09630 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HOXC6P09630 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HOXC6P09630 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 FKBP4P6-201ENST00000457486 1332 ntBASIC17.16■□□□□ 0.34
HOXC6P09630 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC6P09630 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms