Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 RPL5P21-201ENST00000404620 815 ntBASIC16.86■□□□□ 0.29
CLTAP09496 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.86■□□□□ 0.29
CLTAP09496 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.86■□□□□ 0.29
CLTAP09496 AC107373.2-201ENST00000607735 490 ntBASIC16.86■□□□□ 0.29
CLTAP09496 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.86■□□□□ 0.29
CLTAP09496 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.86■□□□□ 0.29
CLTAP09496 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.86■□□□□ 0.29
CLTAP09496 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLTAP09496 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CLTAP09496 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CLTAP09496 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLTAP09496 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLTAP09496 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.86■□□□□ 0.29
CLTAP09496 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.85■□□□□ 0.29
CLTAP09496 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.85■□□□□ 0.29
CLTAP09496 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLTAP09496 PPT1-215ENST00000641471 2368 ntBASIC16.85■□□□□ 0.29
CLTAP09496 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.85■□□□□ 0.29
CLTAP09496 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.85■□□□□ 0.29
CLTAP09496 AC007389.4-201ENST00000454674 793 ntBASIC16.85■□□□□ 0.29
CLTAP09496 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.85■□□□□ 0.29
CLTAP09496 GIMAP3P-201ENST00000495150 836 ntBASIC16.85■□□□□ 0.29
CLTAP09496 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.85■□□□□ 0.29
CLTAP09496 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.85■□□□□ 0.29
CLTAP09496 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLTAP09496 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.85■□□□□ 0.29
CLTAP09496 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.85■□□□□ 0.29
CLTAP09496 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLTAP09496 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLTAP09496 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CLTAP09496 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
CLTAP09496 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLTAP09496 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLTAP09496 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.85■□□□□ 0.29
CLTAP09496 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.84■□□□□ 0.29
CLTAP09496 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.84■□□□□ 0.29
CLTAP09496 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLTAP09496 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.84■□□□□ 0.29
CLTAP09496 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.84■□□□□ 0.29
CLTAP09496 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.84■□□□□ 0.29
CLTAP09496 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.84■□□□□ 0.29
CLTAP09496 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
CLTAP09496 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLTAP09496 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.84■□□□□ 0.29
CLTAP09496 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.84■□□□□ 0.29
CLTAP09496 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms