Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DOAP06340 REXO1L5P-201ENST00000622260 2098 ntBASIC18.02■□□□□ 0.47
HLA-DOAP06340 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.02■□□□□ 0.47
HLA-DOAP06340 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DOAP06340 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 MIR1247-201ENST00000408206 136 ntBASIC18.01■□□□□ 0.47
HLA-DOAP06340 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 AL591846.1-201ENST00000451736 433 ntBASIC18.01■□□□□ 0.47
HLA-DOAP06340 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 OR10B1P-201ENST00000601666 907 ntBASIC18.01■□□□□ 0.47
HLA-DOAP06340 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 CICP11-201ENST00000434745 2827 ntBASIC18.01■□□□□ 0.47
HLA-DOAP06340 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DOAP06340 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DOAP06340 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DOAP06340 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DOAP06340 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
HLA-DOAP06340 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HLA-DOAP06340 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
HLA-DOAP06340 GPAA1P2-201ENST00000417923 928 ntBASIC18■□□□□ 0.47
HLA-DOAP06340 AC079178.1-201ENST00000420915 656 ntBASIC18■□□□□ 0.47
HLA-DOAP06340 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DOAP06340 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 AC104306.2-201ENST00000451877 341 ntBASIC18■□□□□ 0.47
HLA-DOAP06340 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 RPSAP36-202ENST00000494591 1261 ntBASIC18■□□□□ 0.47
HLA-DOAP06340 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DOAP06340 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18■□□□□ 0.47
HLA-DOAP06340 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18■□□□□ 0.47
HLA-DOAP06340 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18■□□□□ 0.47
HLA-DOAP06340 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
HLA-DOAP06340 DUX4L47-201ENST00000566374 394 ntBASIC18■□□□□ 0.47
HLA-DOAP06340 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18■□□□□ 0.47
HLA-DOAP06340 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18■□□□□ 0.47
HLA-DOAP06340 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
HLA-DOAP06340 AC005695.3-201ENST00000614522 232 ntBASIC18■□□□□ 0.47
HLA-DOAP06340 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DOAP06340 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
HLA-DOAP06340 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DOAP06340 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 AL360270.3-201ENST00000609118 1348 ntBASIC17.99■□□□□ 0.47
HLA-DOAP06340 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms