Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 AC026748.1-201ENST00000624349 3251 ntBASIC14.47□□□□□ -0.09
PDGFAP04085 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFAP04085 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 AC004945.1-201ENST00000416738 983 ntBASIC14.47□□□□□ -0.09
PDGFAP04085 GPAA1P2-201ENST00000417923 928 ntBASIC14.47□□□□□ -0.09
PDGFAP04085 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PDGFAP04085 AC016694.1-201ENST00000434179 700 ntBASIC14.47□□□□□ -0.09
PDGFAP04085 YBX1P6-201ENST00000442962 1002 ntBASIC14.47□□□□□ -0.09
PDGFAP04085 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 PFN1P12-201ENST00000455938 534 ntBASIC14.47□□□□□ -0.09
PDGFAP04085 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
PDGFAP04085 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFAP04085 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFAP04085 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PDGFAP04085 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFAP04085 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.47□□□□□ -0.09
PDGFAP04085 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 AC022532.1-201ENST00000624563 1728 ntBASIC14.46□□□□□ -0.09
PDGFAP04085 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.46□□□□□ -0.09
PDGFAP04085 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
PDGFAP04085 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.46□□□□□ -0.09
PDGFAP04085 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
PDGFAP04085 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PDGFAP04085 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFAP04085 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
PDGFAP04085 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.46□□□□□ -0.09
PDGFAP04085 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.46□□□□□ -0.09
PDGFAP04085 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFAP04085 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFAP04085 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.46□□□□□ -0.09
PDGFAP04085 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.46□□□□□ -0.09
PDGFAP04085 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PDGFAP04085 AC245100.5-201ENST00000452108 331 ntBASIC14.46□□□□□ -0.09
PDGFAP04085 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFAP04085 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 SLED1-202ENST00000512051 380 ntBASIC14.46□□□□□ -0.09
PDGFAP04085 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.46□□□□□ -0.09
PDGFAP04085 KRT90P-201ENST00000549264 1064 ntBASIC14.46□□□□□ -0.09
PDGFAP04085 AC009486.1-201ENST00000569860 813 ntBASIC14.46□□□□□ -0.09
PDGFAP04085 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.46□□□□□ -0.09
PDGFAP04085 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFAP04085 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFAP04085 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PDGFAP04085 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
PDGFAP04085 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
PDGFAP04085 REXO1L8P-201ENST00000604378 1897 ntBASIC14.46□□□□□ -0.1
PDGFAP04085 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PDGFAP04085 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.46□□□□□ -0.1
PDGFAP04085 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDGFAP04085 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
PDGFAP04085 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
PDGFAP04085 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDGFAP04085 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.46□□□□□ -0.1
PDGFAP04085 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PDGFAP04085 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
PDGFAP04085 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms