Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 SOCS2P1-201ENST00000417727 557 ntBASIC13.73□□□□□ -0.21
CNOT4O95628 AC098850.1-201ENST00000419919 790 ntBASIC13.73□□□□□ -0.21
CNOT4O95628 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.73□□□□□ -0.21
CNOT4O95628 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.73□□□□□ -0.21
CNOT4O95628 CTBP2P3-201ENST00000585629 1255 ntBASIC13.73□□□□□ -0.21
CNOT4O95628 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CNOT4O95628 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 AL049840.4-201ENST00000602422 811 ntBASIC13.73□□□□□ -0.21
CNOT4O95628 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 AL033527.5-201ENST00000641382 801 ntBASIC13.73□□□□□ -0.21
CNOT4O95628 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CNOT4O95628 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CNOT4O95628 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CNOT4O95628 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.72□□□□□ -0.21
CNOT4O95628 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.72□□□□□ -0.21
CNOT4O95628 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.72□□□□□ -0.21
CNOT4O95628 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.72□□□□□ -0.21
CNOT4O95628 AC026410.3-201ENST00000514280 936 ntBASIC13.72□□□□□ -0.21
CNOT4O95628 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.72□□□□□ -0.21
CNOT4O95628 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.72□□□□□ -0.21
CNOT4O95628 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 WFDC1-204ENST00000613603 549 ntBASIC13.72□□□□□ -0.21
CNOT4O95628 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CNOT4O95628 AC010491.1-201ENST00000563101 2797 ntBASIC13.72□□□□□ -0.21
CNOT4O95628 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CNOT4O95628 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CNOT4O95628 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.72□□□□□ -0.21
CNOT4O95628 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CNOT4O95628 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CNOT4O95628 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CNOT4O95628 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.71□□□□□ -0.21
CNOT4O95628 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms