Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
POLR1AO95602 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC21.83■■□□□ 1.08
POLR1AO95602 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLR1AO95602 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLR1AO95602 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLR1AO95602 RBM38-204ENST00000371219 760 ntTSL 2 BASIC21.83■■□□□ 1.08
POLR1AO95602 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC21.83■■□□□ 1.08
POLR1AO95602 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC21.83■■□□□ 1.08
POLR1AO95602 NAGK-204ENST00000443872 878 ntTSL 3 BASIC21.83■■□□□ 1.08
POLR1AO95602 PIN4P1-201ENST00000451079 396 ntBASIC21.83■■□□□ 1.08
POLR1AO95602 AC079112.1-201ENST00000454972 939 ntBASIC21.83■■□□□ 1.08
POLR1AO95602 HLA-J-204ENST00000495278 958 ntBASIC21.83■■□□□ 1.08
POLR1AO95602 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC21.83■■□□□ 1.08
POLR1AO95602 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC21.83■■□□□ 1.08
POLR1AO95602 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLR1AO95602 AC138466.3-201ENST00000619983 221 ntBASIC21.83■■□□□ 1.08
POLR1AO95602 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC21.83■■□□□ 1.08
POLR1AO95602 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC21.83■■□□□ 1.08
POLR1AO95602 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLR1AO95602 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
POLR1AO95602 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC21.83■■□□□ 1.08
POLR1AO95602 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
POLR1AO95602 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.83■■□□□ 1.08
POLR1AO95602 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
POLR1AO95602 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC21.82■■□□□ 1.08
POLR1AO95602 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
POLR1AO95602 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC21.82■■□□□ 1.08
POLR1AO95602 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC21.82■■□□□ 1.08
POLR1AO95602 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
POLR1AO95602 CLUHP2-201ENST00000426660 1303 ntBASIC21.82■■□□□ 1.08
POLR1AO95602 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 AC006486.2-201ENST00000624246 2199 ntBASIC21.82■■□□□ 1.08
POLR1AO95602 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
POLR1AO95602 AL645937.2-201ENST00000396808 931 ntBASIC21.82■■□□□ 1.08
POLR1AO95602 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC21.82■■□□□ 1.08
POLR1AO95602 AP002803.1-201ENST00000528836 498 ntBASIC21.82■■□□□ 1.08
POLR1AO95602 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 DNM1P30-201ENST00000563586 452 ntBASIC21.82■■□□□ 1.08
POLR1AO95602 AL132994.2-201ENST00000603120 687 ntBASIC21.82■■□□□ 1.08
POLR1AO95602 AL603764.1-201ENST00000636452 321 ntBASIC21.82■■□□□ 1.08
POLR1AO95602 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 AC087481.3-201ENST00000602886 1894 ntBASIC21.82■■□□□ 1.08
POLR1AO95602 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC21.82■■□□□ 1.08
POLR1AO95602 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POLR1AO95602 REXO1L4P-201ENST00000605109 1937 ntBASIC21.81■■□□□ 1.08
POLR1AO95602 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
POLR1AO95602 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC21.81■■□□□ 1.08
POLR1AO95602 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.81■■□□□ 1.08
POLR1AO95602 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC21.81■■□□□ 1.08
POLR1AO95602 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC21.81■■□□□ 1.08
POLR1AO95602 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC21.81■■□□□ 1.08
POLR1AO95602 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC21.81■■□□□ 1.08
POLR1AO95602 AL162426.1-201ENST00000624141 743 ntBASIC21.81■■□□□ 1.08
POLR1AO95602 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC21.81■■□□□ 1.08
POLR1AO95602 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC21.81■■□□□ 1.08
POLR1AO95602 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC21.81■■□□□ 1.08
POLR1AO95602 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
POLR1AO95602 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
POLR1AO95602 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1AO95602 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR1AO95602 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR1AO95602 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC21.8■■□□□ 1.08
POLR1AO95602 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC21.8■■□□□ 1.08
POLR1AO95602 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC21.8■■□□□ 1.08
POLR1AO95602 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC21.8■■□□□ 1.08
POLR1AO95602 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
POLR1AO95602 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC21.8■■□□□ 1.08
POLR1AO95602 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC21.8■■□□□ 1.08
POLR1AO95602 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1AO95602 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms