Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD4O95243 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.28■□□□□ 0.52
MBD4O95243 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.28■□□□□ 0.52
MBD4O95243 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD4O95243 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
MBD4O95243 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD4O95243 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD4O95243 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD4O95243 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
MBD4O95243 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MBD4O95243 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MBD4O95243 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
MBD4O95243 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.27■□□□□ 0.52
MBD4O95243 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
MBD4O95243 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.27■□□□□ 0.52
MBD4O95243 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.27■□□□□ 0.52
MBD4O95243 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MBD4O95243 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.27■□□□□ 0.52
MBD4O95243 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.27■□□□□ 0.52
MBD4O95243 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MBD4O95243 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MBD4O95243 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MBD4O95243 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MBD4O95243 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.26■□□□□ 0.51
MBD4O95243 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.26■□□□□ 0.51
MBD4O95243 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.26■□□□□ 0.51
MBD4O95243 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.26■□□□□ 0.51
MBD4O95243 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.26■□□□□ 0.51
MBD4O95243 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.26■□□□□ 0.51
MBD4O95243 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.26■□□□□ 0.51
MBD4O95243 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.26■□□□□ 0.51
MBD4O95243 AC099336.1-201ENST00000417053 1171 ntBASIC18.26■□□□□ 0.51
MBD4O95243 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 CNN2P8-201ENST00000421872 913 ntBASIC18.26■□□□□ 0.51
MBD4O95243 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MBD4O95243 AC007274.1-201ENST00000439805 662 ntBASIC18.26■□□□□ 0.51
MBD4O95243 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.26■□□□□ 0.51
MBD4O95243 BNIP3P42-201ENST00000454982 569 ntBASIC18.26■□□□□ 0.51
MBD4O95243 AC022616.1-201ENST00000518688 554 ntBASIC18.26■□□□□ 0.51
MBD4O95243 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.26■□□□□ 0.51
MBD4O95243 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.26■□□□□ 0.51
MBD4O95243 AC078819.1-201ENST00000547454 765 ntBASIC18.26■□□□□ 0.51
MBD4O95243 AC012085.1-201ENST00000548270 765 ntBASIC18.26■□□□□ 0.51
MBD4O95243 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.26■□□□□ 0.51
MBD4O95243 BNIP3P29-201ENST00000598302 571 ntBASIC18.26■□□□□ 0.51
MBD4O95243 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.26■□□□□ 0.51
MBD4O95243 AC011447.5-201ENST00000616168 564 ntBASIC18.26■□□□□ 0.51
MBD4O95243 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.26■□□□□ 0.51
MBD4O95243 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MBD4O95243 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.26■□□□□ 0.51
MBD4O95243 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.26■□□□□ 0.51
MBD4O95243 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MBD4O95243 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MBD4O95243 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MBD4O95243 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD4O95243 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.25■□□□□ 0.51
MBD4O95243 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MBD4O95243 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD4O95243 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MBD4O95243 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.25■□□□□ 0.51
MBD4O95243 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD4O95243 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms