Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 BX539320.1-201ENST00000623759 877 ntBASIC14.17□□□□□ -0.14
NKX2-2O95096 PRSS30P-206ENST00000641773 873 ntBASIC14.17□□□□□ -0.14
NKX2-2O95096 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NKX2-2O95096 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.17□□□□□ -0.14
NKX2-2O95096 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-2O95096 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-2O95096 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 FGD5P1-202ENST00000614866 2498 ntBASIC14.17□□□□□ -0.14
NKX2-2O95096 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
NKX2-2O95096 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-2O95096 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 SOCS2P1-201ENST00000417727 557 ntBASIC14.16□□□□□ -0.14
NKX2-2O95096 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-2O95096 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-2O95096 TERF1P3-201ENST00000505638 1227 ntBASIC14.16□□□□□ -0.14
NKX2-2O95096 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.16□□□□□ -0.14
NKX2-2O95096 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.16□□□□□ -0.14
NKX2-2O95096 AC140912.1-201ENST00000577171 1054 ntBASIC14.16□□□□□ -0.14
NKX2-2O95096 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.16□□□□□ -0.14
NKX2-2O95096 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-2O95096 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX2-2O95096 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX2-2O95096 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NKX2-2O95096 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-2O95096 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NKX2-2O95096 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 CICP24-201ENST00000605464 2705 ntBASIC14.15□□□□□ -0.14
NKX2-2O95096 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 AL157414.3-201ENST00000624276 1954 ntBASIC14.15□□□□□ -0.14
NKX2-2O95096 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX2-2O95096 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 HMGN1P19-201ENST00000436976 333 ntBASIC14.15□□□□□ -0.14
NKX2-2O95096 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
NKX2-2O95096 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.15□□□□□ -0.14
NKX2-2O95096 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX2-2O95096 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.15□□□□□ -0.14
NKX2-2O95096 AC190387.1-201ENST00000551683 408 ntBASIC14.15□□□□□ -0.14
NKX2-2O95096 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX2-2O95096 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.15□□□□□ -0.14
NKX2-2O95096 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms