Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFPL1O75677 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
RFPL1O75677 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFPL1O75677 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.46■□□□□ 0.07
RFPL1O75677 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RFPL1O75677 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.46■□□□□ 0.07
RFPL1O75677 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFPL1O75677 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RFPL1O75677 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RFPL1O75677 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFPL1O75677 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFPL1O75677 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.46■□□□□ 0.07
RFPL1O75677 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFPL1O75677 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RFPL1O75677 PIN1P1-201ENST00000412108 996 ntBASIC15.46■□□□□ 0.07
RFPL1O75677 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.46■□□□□ 0.07
RFPL1O75677 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.46■□□□□ 0.07
RFPL1O75677 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.46■□□□□ 0.07
RFPL1O75677 AC004890.2-204ENST00000481968 304 ntBASIC15.46■□□□□ 0.07
RFPL1O75677 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.46■□□□□ 0.07
RFPL1O75677 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
RFPL1O75677 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.46■□□□□ 0.07
RFPL1O75677 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.46■□□□□ 0.07
RFPL1O75677 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.46■□□□□ 0.07
RFPL1O75677 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.46■□□□□ 0.07
RFPL1O75677 BX640514.1-201ENST00000583223 1918 ntBASIC15.46■□□□□ 0.07
RFPL1O75677 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.46■□□□□ 0.07
RFPL1O75677 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFPL1O75677 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFPL1O75677 AC018529.2-202ENST00000611482 3087 ntBASIC15.46■□□□□ 0.07
RFPL1O75677 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.46■□□□□ 0.06
RFPL1O75677 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RFPL1O75677 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RFPL1O75677 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RFPL1O75677 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFPL1O75677 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFPL1O75677 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RFPL1O75677 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
RFPL1O75677 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
RFPL1O75677 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFPL1O75677 AC097359.2-201ENST00000604992 2389 ntBASIC15.45■□□□□ 0.06
RFPL1O75677 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.45■□□□□ 0.06
RFPL1O75677 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RFPL1O75677 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.45■□□□□ 0.06
RFPL1O75677 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.45■□□□□ 0.06
RFPL1O75677 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.45■□□□□ 0.06
RFPL1O75677 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFPL1O75677 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.45■□□□□ 0.06
RFPL1O75677 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFPL1O75677 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 KRT8P12-202ENST00000472924 1397 ntBASIC15.45■□□□□ 0.06
RFPL1O75677 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.45■□□□□ 0.06
RFPL1O75677 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.45■□□□□ 0.06
RFPL1O75677 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
RFPL1O75677 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFPL1O75677 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFPL1O75677 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.44■□□□□ 0.06
RFPL1O75677 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFPL1O75677 AC100757.3-201ENST00000622361 1406 ntBASIC15.44■□□□□ 0.06
RFPL1O75677 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.44■□□□□ 0.06
RFPL1O75677 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFPL1O75677 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFPL1O75677 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFPL1O75677 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.44■□□□□ 0.06
RFPL1O75677 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.44■□□□□ 0.06
RFPL1O75677 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.44■□□□□ 0.06
RFPL1O75677 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RFPL1O75677 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.44■□□□□ 0.06
RFPL1O75677 CR383656.12-201ENST00000549567 513 ntBASIC15.44■□□□□ 0.06
RFPL1O75677 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.44■□□□□ 0.06
RFPL1O75677 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.44■□□□□ 0.06
RFPL1O75677 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms