Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 TCAF2P1-201ENST00000291129 2421 ntBASIC15.54■□□□□ 0.08
PRAMEF11O60813 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 LILRP1-201ENST00000444199 1370 ntBASIC15.54■□□□□ 0.08
PRAMEF11O60813 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 AC005034.1-201ENST00000426657 489 ntBASIC15.54■□□□□ 0.08
PRAMEF11O60813 AP001889.1-201ENST00000525414 633 ntBASIC15.54■□□□□ 0.08
PRAMEF11O60813 SLC25A47P1-201ENST00000531577 414 ntBASIC15.54■□□□□ 0.08
PRAMEF11O60813 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 AL035252.4-201ENST00000624174 288 ntBASIC15.54■□□□□ 0.08
PRAMEF11O60813 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRAMEF11O60813 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PRAMEF11O60813 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 AC022616.1-201ENST00000518688 554 ntBASIC15.53■□□□□ 0.08
PRAMEF11O60813 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRAMEF11O60813 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.53■□□□□ 0.08
PRAMEF11O60813 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 LINC00554-201ENST00000564841 3011 ntBASIC15.52■□□□□ 0.08
PRAMEF11O60813 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF11O60813 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF11O60813 AC063926.2-201ENST00000623766 1308 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms