| HDAC3 | O15379 | SLC25A21-AS1-201 | ENST00000556667 | 1924 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AC007787.1-201 | ENST00000588095 | 1583 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | MPP6-201 | ENST00000222644 | 8452 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | PIK3R1-211 | ENST00000521381 | 7011 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | PRMT7-202 | ENST00000441236 | 2204 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | HNRNPA0-201 | ENST00000314940 | 8726 nt | APPRIS P1 BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ZNF7-203 | ENST00000525266 | 1874 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | UBA1-201 | ENST00000335972 | 3559 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | TEX28-203 | ENST00000617225 | 1525 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | KLHDC8A-202 | ENST00000367156 | 3177 nt | APPRIS P1 TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | UBE2I-201 | ENST00000325437 | 2832 nt | APPRIS P1 TSL 3 BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ARHGAP9-213 | ENST00000550288 | 2818 nt | TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ZFAND6-201 | ENST00000261749 | 1814 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | PLEKHN1-202 | ENST00000379409 | 2455 nt | APPRIS ALT2 TSL 2 BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ZBTB45P1-201 | ENST00000452761 | 1456 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AC138969.3-201 | ENST00000546612 | 1459 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AC138932.2-201 | ENST00000548268 | 1459 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AC126755.4-201 | ENST00000549796 | 1459 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | SNX2-201 | ENST00000379516 | 2128 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | FES-203 | ENST00000394302 | 2133 nt | TSL 5 BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AL928921.2-201 | ENST00000641325 | 2442 nt | BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | SRRD-201 | ENST00000215917 | 4020 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | CYB561-201 | ENST00000360793 | 3001 nt | APPRIS P1 TSL 1 (best) BASIC | 15.01 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | HEPN1-201 | ENST00000408930 | 1434 nt | APPRIS P1 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ARMC5-202 | ENST00000408912 | 3626 nt | APPRIS ALT2 TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | FGF7P3-202 | ENST00000640245 | 1707 nt | TSL 4 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | UBE2G2-202 | ENST00000345496 | 3566 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | CGN-201 | ENST00000271636 | 5091 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | NF2-205 | ENST00000361452 | 5884 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | TNN-203 | ENST00000622870 | 3719 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | OSBPL7-211 | ENST00000613735 | 2836 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | BAIAP2-220 | ENST00000575712 | 2512 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | BEND3P1-201 | ENST00000421591 | 1944 nt | BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | OS9-207 | ENST00000439210 | 1946 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ITSN2-203 | ENST00000406921 | 4563 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | PFKFB4-201 | ENST00000232375 | 3586 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | UMODL1-AS1-201 | ENST00000329015 | 2141 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | GRM5-203 | ENST00000393294 | 1268 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AL133267.1-201 | ENST00000398220 | 340 nt | BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AP001056.1-201 | ENST00000411956 | 821 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AL353597.1-201 | ENST00000414875 | 998 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | HCG15-203 | ENST00000438190 | 1032 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AC022201.2-201 | ENST00000445084 | 287 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AC008406.2-201 | ENST00000507058 | 532 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | PP7080-204 | ENST00000510714 | 601 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | SLED1-202 | ENST00000512051 | 380 nt | BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | LINC02123-201 | ENST00000514869 | 885 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | FKBP5-203 | ENST00000539068 | 3827 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | NDUFA4L2-206 | ENST00000556732 | 883 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | LINC00473-203 | ENST00000581850 | 929 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AC104971.3-201 | ENST00000589794 | 335 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | UBL5-208 | ENST00000593087 | 320 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ACTN2-206 | ENST00000542672 | 4906 nt | APPRIS ALT1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | SLC7A8-212 | ENST00000529705 | 1819 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | MIOS-201 | ENST00000340080 | 3453 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | IMPDH1P4-201 | ENST00000445028 | 1534 nt | BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | B3GNTL1-211 | ENST00000576599 | 1787 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | IGDCC3-201 | ENST00000327987 | 4479 nt | APPRIS P2 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | F2-201 | ENST00000311907 | 2023 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ZNF365-207 | ENST00000410046 | 3379 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | RASA3-201 | ENST00000334062 | 4191 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | XPNPEP1-218 | ENST00000502935 | 2539 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | KDM2B-205 | ENST00000536437 | 2762 nt | TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | LRRC17-202 | ENST00000339431 | 1963 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | FBLN2-203 | ENST00000404922 | 4318 nt | APPRIS P4 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | C1R-201 | ENST00000535233 | 2211 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AUTS2-217 | ENST00000611706 | 4583 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | COL25A1-203 | ENST00000399132 | 2724 nt | APPRIS P4 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | TAF4B-203 | ENST00000578121 | 3204 nt | APPRIS ALT2 TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ABHD16A-202 | ENST00000440843 | 1906 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ILF2-205 | ENST00000615950 | 1906 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | CDH23-202 | ENST00000299366 | 3954 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | IQCE-201 | ENST00000325979 | 2179 nt | APPRIS ALT2 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | USP36-201 | ENST00000312010 | 5234 nt | APPRIS P2 TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | MICAL3-206 | ENST00000441493 | 9445 nt | APPRIS P1 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | CALB2-202 | ENST00000349553 | 1373 nt | TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | KRT8P12-202 | ENST00000472924 | 1397 nt | BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | SYT5-201 | ENST00000354308 | 3792 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | PMP22-201 | ENST00000312280 | 1810 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | KIAA0895L-202 | ENST00000561621 | 3500 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | CLN3-216 | ENST00000565316 | 1318 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | RSPH9-201 | ENST00000372163 | 2534 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ABTB2-201 | ENST00000435224 | 4902 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | INHBA-205 | ENST00000638023 | 2002 nt | APPRIS P1 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | PTPRU-205 | ENST00000460170 | 5337 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ACE-201 | ENST00000290863 | 2479 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | MSC-AS1-208 | ENST00000522519 | 1537 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | SIRT6-203 | ENST00000594279 | 1507 nt | TSL 3 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ACER2-201 | ENST00000340967 | 2238 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | OSBPL5-203 | ENST00000389989 | 3619 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ZNF664-204 | ENST00000538932 | 4321 nt | APPRIS P1 TSL 3 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | RPS19-201 | ENST00000221975 | 500 nt | TSL 3 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | HSPB1-201 | ENST00000248553 | 909 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | NDUFS8-201 | ENST00000313468 | 791 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | METTL26-202 | ENST00000338401 | 544 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | C14orf178-201 | ENST00000355883 | 642 nt | APPRIS P3 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | YBX2P1-201 | ENST00000394192 | 760 nt | BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | SYS1-203 | ENST00000414310 | 795 nt | TSL 3 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | AC009720.1-201 | ENST00000511867 | 586 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| HDAC3 | O15379 | ANKRD34C-AS1-203 | ENST00000559225 | 528 nt | TSL 4 BASIC | 14.99 | □□□□□ -0.01 | | |