Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 AC105250.1-201ENST00000509378 2057 ntBASIC15.36■□□□□ 0.05
MID1O15344 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 MIR326-201ENST00000362220 95 ntBASIC15.36■□□□□ 0.05
MID1O15344 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.36■□□□□ 0.05
MID1O15344 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 RPL5P21-201ENST00000404620 815 ntBASIC15.36■□□□□ 0.05
MID1O15344 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.36■□□□□ 0.05
MID1O15344 FAM86HP-204ENST00000513466 959 ntBASIC15.36■□□□□ 0.05
MID1O15344 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
MID1O15344 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 AC091271.1-201ENST00000611877 1162 ntBASIC15.36■□□□□ 0.05
MID1O15344 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 AL354989.2-201ENST00000435838 1540 ntBASIC15.36■□□□□ 0.05
MID1O15344 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MID1O15344 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.36■□□□□ 0.05
MID1O15344 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MID1O15344 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.36■□□□□ 0.05
MID1O15344 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MID1O15344 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MID1O15344 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.35■□□□□ 0.05
MID1O15344 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.35■□□□□ 0.05
MID1O15344 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.35■□□□□ 0.05
MID1O15344 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
MID1O15344 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MID1O15344 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.35■□□□□ 0.05
MID1O15344 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.35■□□□□ 0.05
MID1O15344 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.35■□□□□ 0.05
MID1O15344 CD8B2-202ENST00000417670 633 ntBASIC15.35■□□□□ 0.05
MID1O15344 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.35■□□□□ 0.05
MID1O15344 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.35■□□□□ 0.05
MID1O15344 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.35■□□□□ 0.05
MID1O15344 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.35■□□□□ 0.05
MID1O15344 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MID1O15344 ENPP7P14-201ENST00000621765 1040 ntBASIC15.35■□□□□ 0.05
MID1O15344 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
MID1O15344 AC126755.1-201ENST00000525846 6405 ntBASIC15.35■□□□□ 0.05
MID1O15344 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.35■□□□□ 0.05
MID1O15344 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.35■□□□□ 0.05
MID1O15344 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MID1O15344 KRT8P44-201ENST00000441609 1350 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms