Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.18□□□□□ -0.14
TO15178 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TO15178 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TO15178 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TO15178 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TO15178 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.18□□□□□ -0.14
TO15178 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.18□□□□□ -0.14
TO15178 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TO15178 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 ACKR1-201ENST00000368121 1240 ntBASIC14.18□□□□□ -0.14
TO15178 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.18□□□□□ -0.14
TO15178 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.18□□□□□ -0.14
TO15178 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.18□□□□□ -0.14
TO15178 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.18□□□□□ -0.14
TO15178 AL596325.1-201ENST00000563991 1082 ntBASIC14.18□□□□□ -0.14
TO15178 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 BX539320.1-201ENST00000623759 877 ntBASIC14.18□□□□□ -0.14
TO15178 CU634019.7-201ENST00000624153 1185 ntBASIC14.18□□□□□ -0.14
TO15178 FP236241.2-201ENST00000624906 1185 ntBASIC14.18□□□□□ -0.14
TO15178 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.18□□□□□ -0.14
TO15178 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.18□□□□□ -0.14
TO15178 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TO15178 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TO15178 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 AC023157.3-201ENST00000619086 2088 ntBASIC14.18□□□□□ -0.14
TO15178 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TO15178 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.17□□□□□ -0.14
TO15178 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TO15178 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.17□□□□□ -0.14
TO15178 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.17□□□□□ -0.14
TO15178 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.17□□□□□ -0.14
TO15178 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.17□□□□□ -0.14
TO15178 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.17□□□□□ -0.14
TO15178 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.17□□□□□ -0.14
TO15178 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TO15178 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TO15178 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 RN7SL692P-201ENST00000464677 288 ntBASIC14.17□□□□□ -0.14
TO15178 AC011495.1-201ENST00000498085 584 ntBASIC14.17□□□□□ -0.14
TO15178 AP005018.1-201ENST00000525475 301 ntBASIC14.17□□□□□ -0.14
TO15178 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.17□□□□□ -0.14
TO15178 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TO15178 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TO15178 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TO15178 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TO15178 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 AP001063.1-201ENST00000568332 529 ntBASIC14.17□□□□□ -0.14
TO15178 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.17□□□□□ -0.14
TO15178 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TO15178 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.17□□□□□ -0.14
TO15178 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.17□□□□□ -0.14
TO15178 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
TO15178 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.17□□□□□ -0.14
TO15178 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.17□□□□□ -0.14
TO15178 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TO15178 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TO15178 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TO15178 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TO15178 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms