Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A1O14983 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP2A1O14983 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.52■□□□□ 0.4
ATP2A1O14983 AC092127.1-201ENST00000567093 3455 ntBASIC17.52■□□□□ 0.4
ATP2A1O14983 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP2A1O14983 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A1O14983 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP2A1O14983 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
ATP2A1O14983 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A1O14983 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A1O14983 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A1O14983 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A1O14983 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A1O14983 AL513523.2-202ENST00000427283 2040 ntBASIC17.52■□□□□ 0.39
ATP2A1O14983 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A1O14983 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ATP2A1O14983 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 HSPB1P2-201ENST00000448722 546 ntBASIC17.51■□□□□ 0.39
ATP2A1O14983 AL023775.1-201ENST00000454907 1746 ntBASIC17.51■□□□□ 0.39
ATP2A1O14983 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 AL096828.3-201ENST00000615354 462 ntBASIC17.51■□□□□ 0.39
ATP2A1O14983 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A1O14983 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
ATP2A1O14983 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A1O14983 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A1O14983 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATP2A1O14983 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ATP2A1O14983 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATP2A1O14983 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
ATP2A1O14983 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ATP2A1O14983 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.5■□□□□ 0.39
ATP2A1O14983 AC079178.1-201ENST00000420915 656 ntBASIC17.5■□□□□ 0.39
ATP2A1O14983 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.5■□□□□ 0.39
ATP2A1O14983 COX5BP1-201ENST00000507622 393 ntBASIC17.5■□□□□ 0.39
ATP2A1O14983 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ATP2A1O14983 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.5■□□□□ 0.39
ATP2A1O14983 AC104982.3-201ENST00000581995 514 ntBASIC17.5■□□□□ 0.39
ATP2A1O14983 RN7SL713P-201ENST00000582127 302 ntBASIC17.5■□□□□ 0.39
ATP2A1O14983 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP2A1O14983 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ATP2A1O14983 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATP2A1O14983 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
ATP2A1O14983 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATP2A1O14983 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A1O14983 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATP2A1O14983 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms