Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SOCS3O14543 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.63□□□□□ -0.55
SOCS3O14543 AC012508.2-201ENST00000567613 1472 ntBASIC11.63□□□□□ -0.55
SOCS3O14543 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
SOCS3O14543 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SOCS3O14543 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.63□□□□□ -0.55
SOCS3O14543 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SOCS3O14543 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SOCS3O14543 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SOCS3O14543 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SOCS3O14543 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SOCS3O14543 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SOCS3O14543 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SOCS3O14543 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.62□□□□□ -0.55
SOCS3O14543 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SOCS3O14543 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
SOCS3O14543 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SOCS3O14543 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.62□□□□□ -0.55
SOCS3O14543 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SOCS3O14543 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.62□□□□□ -0.55
SOCS3O14543 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.62□□□□□ -0.55
SOCS3O14543 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.62□□□□□ -0.55
SOCS3O14543 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.62□□□□□ -0.55
SOCS3O14543 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.62□□□□□ -0.55
SOCS3O14543 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.62□□□□□ -0.55
SOCS3O14543 IGHV3-42-201ENST00000520410 361 ntBASIC11.62□□□□□ -0.55
SOCS3O14543 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.62□□□□□ -0.55
SOCS3O14543 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 TIMM17BP1-201ENST00000545713 516 ntBASIC11.62□□□□□ -0.55
SOCS3O14543 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.62□□□□□ -0.55
SOCS3O14543 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.62□□□□□ -0.55
SOCS3O14543 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SOCS3O14543 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SOCS3O14543 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.62□□□□□ -0.55
SOCS3O14543 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.62□□□□□ -0.55
SOCS3O14543 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SOCS3O14543 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.62□□□□□ -0.55
SOCS3O14543 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SOCS3O14543 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 LINC02228-204ENST00000642115 2962 ntBASIC11.61□□□□□ -0.55
SOCS3O14543 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.61□□□□□ -0.55
SOCS3O14543 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SOCS3O14543 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.61□□□□□ -0.55
SOCS3O14543 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SOCS3O14543 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.61□□□□□ -0.55
SOCS3O14543 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SOCS3O14543 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.61□□□□□ -0.55
SOCS3O14543 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SOCS3O14543 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms