Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
UPK2O00526 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.38□□□□□ -0.43
UPK2O00526 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK2O00526 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.38□□□□□ -0.43
UPK2O00526 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.38□□□□□ -0.43
UPK2O00526 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.38□□□□□ -0.43
UPK2O00526 SDHAP3-202ENST00000515467 728 ntBASIC12.38□□□□□ -0.43
UPK2O00526 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.38□□□□□ -0.43
UPK2O00526 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
UPK2O00526 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK2O00526 AC010336.2-201ENST00000564226 506 ntBASIC12.38□□□□□ -0.43
UPK2O00526 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK2O00526 AL138828.2-201ENST00000615812 383 ntBASIC12.38□□□□□ -0.43
UPK2O00526 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK2O00526 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK2O00526 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
UPK2O00526 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
UPK2O00526 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK2O00526 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK2O00526 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK2O00526 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.38□□□□□ -0.43
UPK2O00526 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK2O00526 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK2O00526 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK2O00526 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK2O00526 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
UPK2O00526 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
UPK2O00526 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.37□□□□□ -0.43
UPK2O00526 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.37□□□□□ -0.43
UPK2O00526 REXO1L4P-201ENST00000605109 1937 ntBASIC12.37□□□□□ -0.43
UPK2O00526 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 AC005089.1-201ENST00000619486 2241 ntBASIC12.37□□□□□ -0.43
UPK2O00526 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.37□□□□□ -0.43
UPK2O00526 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.37□□□□□ -0.43
UPK2O00526 AC109322.1-201ENST00000524499 1264 ntBASIC12.37□□□□□ -0.43
UPK2O00526 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK2O00526 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK2O00526 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK2O00526 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
UPK2O00526 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK2O00526 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
UPK2O00526 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.37□□□□□ -0.43
UPK2O00526 AC073592.8-201ENST00000624126 511 ntBASIC12.37□□□□□ -0.43
UPK2O00526 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK2O00526 AC134684.3-201ENST00000641758 218 ntBASIC12.37□□□□□ -0.43
UPK2O00526 AL109936.8-201ENST00000641772 604 ntBASIC12.37□□□□□ -0.43
UPK2O00526 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.37□□□□□ -0.43
UPK2O00526 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.37□□□□□ -0.43
UPK2O00526 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.37□□□□□ -0.43
UPK2O00526 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK2O00526 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
UPK2O00526 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.36□□□□□ -0.43
UPK2O00526 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.36□□□□□ -0.43
UPK2O00526 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
UPK2O00526 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UPK2O00526 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UPK2O00526 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms