Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 AGAP7P-201ENST00000582299 2062 ntBASIC16.41■□□□□ 0.22
O00370 AGAP14-201ENST00000624701 2060 ntBASIC16.41■□□□□ 0.22
O00370 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.41■□□□□ 0.22
O00370 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.41■□□□□ 0.22
O00370 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.41■□□□□ 0.22
O00370 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.41■□□□□ 0.22
O00370 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.41■□□□□ 0.22
O00370 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.41■□□□□ 0.22
O00370 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.41■□□□□ 0.22
O00370 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.41■□□□□ 0.22
O00370 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.41■□□□□ 0.22
O00370 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.41■□□□□ 0.22
O00370 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.41■□□□□ 0.22
O00370 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.41■□□□□ 0.22
O00370 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.41■□□□□ 0.22
O00370 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.41■□□□□ 0.22
O00370 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.41■□□□□ 0.22
O00370 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
O00370 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
O00370 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
O00370 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.41■□□□□ 0.22
O00370 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
O00370 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
O00370 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
O00370 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 AC106881.1-201ENST00000605849 3329 ntBASIC16.4■□□□□ 0.22
O00370 AC023908.3-201ENST00000564211 3047 ntBASIC16.4■□□□□ 0.22
O00370 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.4■□□□□ 0.22
O00370 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
O00370 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.4■□□□□ 0.22
O00370 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.4■□□□□ 0.22
O00370 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
O00370 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
O00370 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.4■□□□□ 0.22
O00370 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.4■□□□□ 0.22
O00370 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.4■□□□□ 0.22
O00370 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 AC104457.1-201ENST00000401024 814 ntBASIC16.4■□□□□ 0.22
O00370 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
O00370 GHSR-202ENST00000427970 912 ntBASIC16.4■□□□□ 0.22
O00370 AL442647.2-201ENST00000429864 857 ntBASIC16.4■□□□□ 0.22
O00370 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.4■□□□□ 0.22
O00370 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.4■□□□□ 0.22
O00370 RPL13AP25-201ENST00000484130 612 ntBASIC16.4■□□□□ 0.22
O00370 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 CTBP2P3-201ENST00000585629 1255 ntBASIC16.4■□□□□ 0.22
O00370 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
O00370 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.4■□□□□ 0.22
O00370 AC107373.2-201ENST00000607735 490 ntBASIC16.4■□□□□ 0.22
O00370 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
O00370 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.4■□□□□ 0.22
O00370 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.4■□□□□ 0.22
O00370 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.4■□□□□ 0.22
O00370 INTS4P2-202ENST00000614726 2019 ntBASIC16.4■□□□□ 0.22
O00370 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
O00370 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.39■□□□□ 0.21
O00370 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.39■□□□□ 0.21
O00370 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.39■□□□□ 0.21
O00370 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
O00370 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.39■□□□□ 0.21
O00370 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.39■□□□□ 0.21
O00370 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.39■□□□□ 0.21
O00370 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.39■□□□□ 0.21
O00370 AC120045.2-201ENST00000567334 178 ntBASIC16.39■□□□□ 0.21
O00370 AC124283.3-201ENST00000570869 594 ntBASIC16.39■□□□□ 0.21
O00370 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms