Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 TSSK5P-201ENST00000423978 907 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 AC002472.2-201ENST00000442739 958 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.36□□□□□ -0.59
NACAE9PAV3 AC097493.3-201ENST00000509725 367 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 MIR4313-201ENST00000580760 101 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 RN7SL204P-201ENST00000582831 262 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 AL590560.3-201ENST00000623350 461 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
NACAE9PAV3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.36□□□□□ -0.59
NACAE9PAV3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
NACAE9PAV3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.36□□□□□ -0.59
NACAE9PAV3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
NACAE9PAV3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
NACAE9PAV3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 AC236430.1-201ENST00000402231 743 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 TREML5P-201ENST00000421694 576 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.36□□□□□ -0.59
NACAE9PAV3 TSPY16P-201ENST00000449843 468 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 UGT1A2P-201ENST00000454886 866 ntBASIC11.36□□□□□ -0.59
NACAE9PAV3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.36□□□□□ -0.59
NACAE9PAV3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NACAE9PAV3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.35□□□□□ -0.59
NACAE9PAV3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
NACAE9PAV3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.35□□□□□ -0.59
NACAE9PAV3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
NACAE9PAV3 AC023157.3-201ENST00000619086 2088 ntBASIC11.35□□□□□ -0.59
NACAE9PAV3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
NACAE9PAV3 AC100757.3-201ENST00000622361 1406 ntBASIC11.35□□□□□ -0.59
NACAE9PAV3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.35□□□□□ -0.59
NACAE9PAV3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.35□□□□□ -0.59
NACAE9PAV3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
NACAE9PAV3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.35□□□□□ -0.59
NACAE9PAV3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 LINC00528-201ENST00000600723 2160 ntBASIC11.35□□□□□ -0.59
NACAE9PAV3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.35□□□□□ -0.59
NACAE9PAV3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
NACAE9PAV3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.35□□□□□ -0.59
NACAE9PAV3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
NACAE9PAV3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.35□□□□□ -0.59
NACAE9PAV3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.35□□□□□ -0.59
NACAE9PAV3 AC004890.2-204ENST00000481968 304 ntBASIC11.35□□□□□ -0.59
NACAE9PAV3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NACAE9PAV3 AL512356.2-201ENST00000546955 174 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms