Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PLEKHD1A6NEE1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC23.25■■□□□ 1.31
PLEKHD1A6NEE1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PLEKHD1A6NEE1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PLEKHD1A6NEE1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PLEKHD1A6NEE1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
PLEKHD1A6NEE1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 OR2K2-202ENST00000374428 1038 ntBASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 RN7SL818P-201ENST00000485099 259 ntBASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 RN7SL725P-201ENST00000606439 259 ntBASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 PCDH8P1-201ENST00000428983 2773 ntBASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 KRT8P21-201ENST00000430398 1491 ntBASIC23.24■■□□□ 1.31
PLEKHD1A6NEE1 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 PFN2-206ENST00000461930 606 ntTSL 4 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 MIR6842-201ENST00000612539 65 ntBASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 AC007718.1-201ENST00000621078 280 ntBASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 CICP11-201ENST00000434745 2827 ntBASIC23.23■■□□□ 1.31
PLEKHD1A6NEE1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 REXO1L4P-201ENST00000605109 1937 ntBASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 AC006449.5-201ENST00000610658 2098 ntBASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 RN7SL67P-201ENST00000492147 296 ntBASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 AC138894.2-201ENST00000602838 371 ntBASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC23.22■■□□□ 1.31
PLEKHD1A6NEE1 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms