Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.8■□□□□ 0.28
CCDC66A2RUB6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC66A2RUB6 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 FGD5P1-202ENST00000614866 2498 ntBASIC16.79■□□□□ 0.28
CCDC66A2RUB6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.79■□□□□ 0.28
CCDC66A2RUB6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 RPL13AP23-201ENST00000480739 586 ntBASIC16.79■□□□□ 0.28
CCDC66A2RUB6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 AL138918.1-201ENST00000568306 659 ntBASIC16.79■□□□□ 0.28
CCDC66A2RUB6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC66A2RUB6 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.78■□□□□ 0.28
CCDC66A2RUB6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 DMBT1P1-203ENST00000636837 4628 ntBASIC16.78■□□□□ 0.28
CCDC66A2RUB6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 AKAP8P1-201ENST00000434743 1349 ntBASIC16.78■□□□□ 0.28
CCDC66A2RUB6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC66A2RUB6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms