Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AC241585.1-201ENST00000433527 519 ntBASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AC092183.1-201ENST00000469884 875 ntBASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AC232323.1-201ENST00000540724 2099 ntBASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 REXO1L5P-201ENST00000622260 2098 ntBASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DRB4X5D2U9 DUX4L27-201ENST00000554796 1261 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms