Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 AC005052.1-201ENST00000625181 2492 ntBASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 AL354877.1-201ENST00000424412 413 ntBASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 AC005740.2-201ENST00000511085 419 ntBASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 AC091544.8-201ENST00000619490 361 ntBASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA1Q9Y5H4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AC011742.3-201ENST00000439053 820 ntBASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHGA1Q9Y5H4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms